| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0733 |
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| Symbol | |
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| ID | 8324896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 810058 |
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| End bp | 812946 |
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| Gene Length | 2889 bp |
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| Protein Length | 962 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644941277 |
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| Product | DNA repair exonuclease, SbcC |
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| Protein accession | YP_003098542 |
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| Protein GI | 256374882 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGCTGC ACCGGTTGGA GCTGTCGGCG TTCGGGCCGT ATCCGGGGCG CGAGGTGGTG
GACTTCGACG CGCTCGGCGC GGACGGGCTG TTCCTGCTGC ACGGGGACAC CGGCGCGGGC
AAGACGACGC TGCTGGACGC GGTCGCGTTC GCCCTGTTCG GGCAGGTGCC GGGGGCGCGC
GGCGAGGTCA AGCGGCTGCG CTGCGACTAC GCGTCCCCGG ACGTGGAGAC GGTGGTGTCG
CTGGAGCTGA CCGTGCGGGA GCGGCGGCTG GTGATCACCC GCAGCCCGGA GTACGAGCGG
CCCAAGAAGC GCGGCGGCGG CACGACCAGG CAGAACGCGA AGGCGGCGCT GGCGTGGGTG
AGCGGCTGGG AGGGCGAGGG GCACGGCCGG ATCGACGAGG TGGCGCGCGA GGTCGAGTCG
CTGCTGGGGA TGACGGCGCA CCAGTTCTTC CAGGTGGTGC TGCTGCCGCA GGGCGAGTTC
GCGCGGTTCC TGCGGGCGGA CACGGGCGAG CGGGAGAAGC TGCTGGAGAA GCTGTTCGGC
ACCGAGCGGT TCCTGGCGGT GGAGAAGTGG TTCCGGGAGC GCCGGGCCGA GCGGGGGCGG
GAGCTGCGGG AGCTGACCGA GGCGAACGTC CGGCTGGCGG GCAACGTCGC CGAGGCCGCC
CGCGCTGAGC AGCCGGAGGA CGGCGGCGAC CCGGCGTGGC TGGAGGCGCT GCTCGGCGGG
CTGGCCGAGG AGGCGGGGCG CGCGCAGGAG CTGGCCGGGA CGACCGCCGA GGCCAGAACC
GGGGCCGAGC GGGCCTGGCA GGGCGCCCGC GACCTGGAGG CGCTGGTGGG GCGGGTGCGC
CGGGCGCACG ACGAGCTGGT GCGGTGCGCG GAGGACGAGC CGGAGCGCAA GCGGCTGCTG
GACGAGGCAG AGGCCGCCAG GCGTGCCGCG CCGGTCGTCC AGGCCCTGCG GGGCGGGGAT
CGGGCGCGGG TGGCGCTGGA GGGCGCTGAG GCGGCGGAAC TGGCCTCGGC GAAGGCGGTG
GGGGCGCTGA TGGGCGGAGT GGTCGCCGAT GACCCGCGCG CCGAGGGCGA GCGCTGCCGC
GACGAGGCCG GTGGGCTCAC CCGGTTGGCG GAGGAGGCGC GGGAGCAGCG GGAGGCGCTG
CGCGCGCTCG ACGCGGTCGT GTCCAGGCGG GAGGTCGCCG CCGCCCGGCT GGCCGAGCTG
ACCGCCGCGC TGGAGGGCGC GCCTGAGCGG CTGCGGTCCG CGCGGGAGGC CGTGGAGGCG
GCGAAGCTGG CCCGCGCGGC ACTGCCGGAG GCCTCAGCCC GAGCCAAGGC CGCTACCGCG
CTACCGGCGG CGGTCCGCGC GTCTGACGAG GCCGAGGCGG CGCGTTCGGT CGCCGTGGAC
GTTCACCAGG CGGCGGTGGA CGCGCGCCAG GCCGTCCGGC AGCGCCGCCT GGACGGCATG
GCCGCCGAAC TGGCCGGTGA GCTGGTGGAC GGGCTGCCGT GCCAGGTCTG CGGCGCGGGA
GAGCATCCCG CGCCCGCCGC GTTCGACGGC GAGGCCGTGA CGGCGGTCGA CGAGGACCGG
GCGGGCGCCG CCGAGGCGGT GGCGCTGGAG CGCAGGCGAG CGGCGGAGGA CGCCGCCTAC
CGGGCGCTGG GGGCCGTGGA CGCCCTGCGG TCCGCCGTCG GCGACCGCGA TCCGGCTGAG
CTGGTGGCCG AGCACCGCGA GCTGGCCGGG CTGGCCGCGC TGACGGCCGA GCGCGAGTCT
GCGCTGCGCG GGCTGGAGAC CGGGACGGCC GCGCTGACCG AGGAGCGCGC GGAGCTGGAG
CGCGACGTGG TCGGCCTGGA GGCGCGCGGG TCCGAGCTGG CGGCGACCAC CGCCGAGCGA
GCCGCACGCC TGGAGCAGGC CCGAGAGGGC TTCCCGGACG TGGCCGCGAG ACGCGCCCAC
CTGCTCTCGG CGGCCGACGC GCTGGACGAG TTGGCCCGCC GCCGCGCCGA GGTCTTGGGT
GCTGCCGAGC GCGCGGCGCA GCTGGCGGGC GAGGTGGCGG AGCAGGTCGC GGAGGCCGGT
TTCGCGACCG CCGCCGACGC CCGTGAGGCT GTCCGCACCG CGGAGCAGGT AGCCGGGTTG
GAGCGCCGGG TGCGCGAGGC CGACGCCGCG AGGGCCGCCG CCGAGGCGGT CGTGGCCGAC
CACCCGGACG TGGACCCTTC GGTGGAGGTC GACGCGGGGG GCGCCGAGCG CCGGTTCCGC
GAGGCCGGCC GGGAGGCGGA GGCGGCGGCG GGTGCGTCGA GCGCGGCGGT TGGCCGGTTG
GCGCGCGCGG AGGAGCTGGC TGAGCGGCTG AGGGCGGCGT GGGCGCGGTT GGCGCCGGTC
GAGGCGGAGT ACCGGGAGCT GGACGCGTTC ACCGACGTGA TCAACGGCCG GGGCCAGAAC
ACCGAGAGCA TGACCCTGCG CACGTACGTG CTGGCCGCGA AGCTGGAGGA GGTCGCGGTC
GCGGCGAGCG AGCGGCTGGA CCGGATGAGC CAGGGCCGCT ACCGCTTCGT GCACTCCACC
GAGGCGGGCC CGCGCGGGGC CAGGGGCGGG CTGGGGCTCG ACGTGCTCGA CGACTACTCC
GGCCACCAAA GGCCCACGAA GACGCTCAGC GGCGGCGAGT CGTTCCTGGC CTCGCTGGCG
CTCGCGCTGG GCCTGGCGGA CGTGGTGTCG CAGGGCGCGG TGCTGGACAC GCTGTTCGTC
GACGAGGGGT TCGGCACGCT CGACGCCGAC ACCCTCGACC TGGTCATGAA CACCCTGGAC
GACCTGCGCG CGGGCGGCCG GGTGGTGGGG CTGGTGTCGC ACGTGGAGGA GCTGCGGCAG
CGCATCCCGA CCCGGTTGAG GGTCAGGAAG GCGCGCGCCG GGTCCACCCT GGAGGTGACC
ACGGCGTAG
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| Protein sequence | MRLHRLELSA FGPYPGREVV DFDALGADGL FLLHGDTGAG KTTLLDAVAF ALFGQVPGAR
GEVKRLRCDY ASPDVETVVS LELTVRERRL VITRSPEYER PKKRGGGTTR QNAKAALAWV
SGWEGEGHGR IDEVAREVES LLGMTAHQFF QVVLLPQGEF ARFLRADTGE REKLLEKLFG
TERFLAVEKW FRERRAERGR ELRELTEANV RLAGNVAEAA RAEQPEDGGD PAWLEALLGG
LAEEAGRAQE LAGTTAEART GAERAWQGAR DLEALVGRVR RAHDELVRCA EDEPERKRLL
DEAEAARRAA PVVQALRGGD RARVALEGAE AAELASAKAV GALMGGVVAD DPRAEGERCR
DEAGGLTRLA EEAREQREAL RALDAVVSRR EVAAARLAEL TAALEGAPER LRSAREAVEA
AKLARAALPE ASARAKAATA LPAAVRASDE AEAARSVAVD VHQAAVDARQ AVRQRRLDGM
AAELAGELVD GLPCQVCGAG EHPAPAAFDG EAVTAVDEDR AGAAEAVALE RRRAAEDAAY
RALGAVDALR SAVGDRDPAE LVAEHRELAG LAALTAERES ALRGLETGTA ALTEERAELE
RDVVGLEARG SELAATTAER AARLEQAREG FPDVAARRAH LLSAADALDE LARRRAEVLG
AAERAAQLAG EVAEQVAEAG FATAADAREA VRTAEQVAGL ERRVREADAA RAAAEAVVAD
HPDVDPSVEV DAGGAERRFR EAGREAEAAA GASSAAVGRL ARAEELAERL RAAWARLAPV
EAEYRELDAF TDVINGRGQN TESMTLRTYV LAAKLEEVAV AASERLDRMS QGRYRFVHST
EAGPRGARGG LGLDVLDDYS GHQRPTKTLS GGESFLASLA LALGLADVVS QGAVLDTLFV
DEGFGTLDAD TLDLVMNTLD DLRAGGRVVG LVSHVEELRQ RIPTRLRVRK ARAGSTLEVT
TA
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