| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0729 |
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| Symbol | ispH |
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| ID | 8324892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 805781 |
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| End bp | 806725 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644941273 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_003098538 |
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| Protein GI | 256374878 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAGC GAGTGCTCCT GGCCAATCCG CGCGGGTACT GCGCGGGCGT TGACCGCGCA
GTCGTCACGG TGGAGAAGGC GCTGGAGAAG TACGGCGCGC CGGTGTACGT CCGCAAGGAG
ATCGTCCACA ACAAGCACGT CGTGGAGACG CTGTCGAAGC GCGGCGCGAT CTTCGTCAAC
GAGACCGACG AGGTGCCCGA GGGCGCGCTG GTGGTGTTCT CCGCCCACGG CGTCTCGCCC
AAGGTGCACG AGGAGGCCGC CGACCGCAGC CTGCGCACCA TCGACGCCAC CTGCCCCCTG
GTGACCAAGG TCCACAAGGA GGCCCAGCGG TTCGCGCGCG AGGACTACGA CATCCTGCTC
ATCGGCCACG AGGGCCACGA GGAGGTCGAG GGCACCGCCG GTGAGGCGCC CGACCACATC
CAGCTCGTGG ACACCGCCGA GGACGTCGCC AAGGTCGAGG TGCGCGACCC GTCCAAGGTG
ATCTGGCTGT CGCAGACCAC GCTGTCGGTC GACGAGACCA TGGTGCGGGT GCGCCAGCTC
AAGGAGCGGT TCCCCGACCT GCAGGAACCG CCGTCGGACG ACATCTGCTA CGCCACCTCC
AACCGGCAGG TCGCGGTGAA GACCATGGCG CCCGAGTGCG ACCTGGTGCT GGTGGTCGGC
TCGAAGAACT CGTCCAACTC GGTGCGGCTG GTCGAGGTCG CGCTGCAGGC GGGCGCGAAG
GCCTCCTACC TGATCGACTA CGCCGAGGAG GTCGACGAGG CCTGGCTGGA GGGCGTCGGC
ACGGTCGGCG TGACCAGCGG CGCCTCGGTG CCGGACATTT TGGTGATGGA CCTGCTCAAG
CACCTGGCCG AGCGCGGCTA CGGCGACGTG GAGGAGATCA CCACGGCCAA CGAGAAGATC
GCGTTCTCGC TGCCGCGCGA GCTGCGCAAG GACTCGGTGC GCTAG
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| Protein sequence | MDKRVLLANP RGYCAGVDRA VVTVEKALEK YGAPVYVRKE IVHNKHVVET LSKRGAIFVN
ETDEVPEGAL VVFSAHGVSP KVHEEAADRS LRTIDATCPL VTKVHKEAQR FAREDYDILL
IGHEGHEEVE GTAGEAPDHI QLVDTAEDVA KVEVRDPSKV IWLSQTTLSV DETMVRVRQL
KERFPDLQEP PSDDICYATS NRQVAVKTMA PECDLVLVVG SKNSSNSVRL VEVALQAGAK
ASYLIDYAEE VDEAWLEGVG TVGVTSGASV PDILVMDLLK HLAERGYGDV EEITTANEKI
AFSLPRELRK DSVR
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