Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0723 |
Symbol | |
ID | 8324886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 801210 |
End bp | 801974 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644941267 |
Product | peptidase S1 and S6 chymotrypsin/Hap |
Protein accession | YP_003098532 |
Protein GI | 256374872 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5640] Secreted trypsin-like serine protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.75056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGATCC GCACCCTGTT CACGGCGGTC GCCGTCGCGG TCGGCGCCGC GCTGGCGTCG GTCGGCGGCG CCCAGGCCGC ACCCACCGAG CCGGACCTGA CCCCGGCCAT CGTGGGCGGC GGCAACGCCA CGCAGACGTA CTCGTTCATG GTGTCCCTGC AGAGCACGGC GGGCAGCCAC TTCTGCGGCG GCTCGCTGAT CAAGGCCAAC TGGGTGGTGA CGGCCAAGCA CTGCGTGCAG GGCCGGACGC CGTCGTCGAT CCGCGCGCGG GTCGGCACGA CCAACCGCAC CAGCGGCGGC ACCGTCGCCA CGGGCGCGCA GGTCGTGACG CACCCCAGCT ACGACATCGC GCTGGTGCGC CTGGCCACCT CGGTGACCCA GGCCCCGATC ACCGTCGCCT CCACCTCGGG CGCGACCGGC ACCGCCACCC GCATCATCGG CTGGGGCCAG ACCTGCGCCC CGGCGGGCGG CTGCGGCGCG CCGACCATCC TGCAGGAGCT GAACACCTCG ATCGTGGCGG ACGGCAGCTG CTCGGGCATC TACGGCGCGT ACGAGATCTG CACGAACAAC CCCGGCGGCA ACAAGGGCGC CTGCTACGGC GACTCGGGCG GCCCGCAGAT CAAGTCCGTG GGCGGCGCCT GGCAGCTGAT CGGCGCGACC AGCCGCGCGG GCAACAACAA CTCCACCTGC GCGACCGGCC CGTCGATCTA CATGGACGTC CCGTCGTTCC GCACCTGGAT CAGCGGGTAC GCGGGAACGG TCTGA
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Protein sequence | MRIRTLFTAV AVAVGAALAS VGGAQAAPTE PDLTPAIVGG GNATQTYSFM VSLQSTAGSH FCGGSLIKAN WVVTAKHCVQ GRTPSSIRAR VGTTNRTSGG TVATGAQVVT HPSYDIALVR LATSVTQAPI TVASTSGATG TATRIIGWGQ TCAPAGGCGA PTILQELNTS IVADGSCSGI YGAYEICTNN PGGNKGACYG DSGGPQIKSV GGAWQLIGAT SRAGNNNSTC ATGPSIYMDV PSFRTWISGY AGTV
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