Gene Amir_0702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0702 
Symbol 
ID8324865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp780021 
End bp781172 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content72% 
IMG OID644941246 
ProductCystathionine gamma-synthase 
Protein accessionYP_003098511 
Protein GI256374851 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.558614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACA GCGGCCCACT CGGCTTCGCA ACGCGGGCGA TCCACACCGG ACAGGAGCCG 
GACCCCACCA CCGGCGCGGT CATCCCGCCG CTCTACGCCA CCTCCACCTA CGCCCAGGAC
GGCGTCGGCG GGCTGCGCAA GGGCTTCGAG TACTCGCGCA CCGGCAACCC AACCCGCACC
GCGCTGGAGC AGTGCCTGGC CGCGCTGGAG GGCGGCCGGT TCGGGCGGGC GTTCGCCAGC
GGCATGGCCG CCACCGACAC CGCGCTGCGG TCGCTGCTGC GCCCCGGTGA CCACCTGGTC
ATCCCGAACG ACACCTACGG CGGCACGTTC CGCCTCATCG ACAAGGTGCT GTCCCAGTGG
GGCGTCGAGC ACACCCCCGT CGCGATCTCC GACGTGGACG CCGTGCGCGC CGCGATCCGC
CCGAACACCA AGCTGGTGTG GGTCGAGACG CCGACCAACC CGCTGCTCAC CATCGCGGAC
ATCGCGCTGC TGGCCGACGC CACCCGCGAC GCCTCGGTGA CGCTGGTCGT GGACAACACG
TTCGCCTCGC CCTACCTGCA GAACCCCCTC GAACTGGGCG CGGACGTGGT CATGCACTCC
ACGACCAAGT ACCTGGGCGG CCACTCCGAC CTCATCGGCG GCGCGCTGGT CACCTCCGAC
GAGGAGCTCG ACACCAAGTT CGCGTTCCTG CAGAACGGCT CCGGCGCGGT GCCCAGCCCG
TTCGACGCGT GGCTGACCCT GCGCAGCCTC AAGACCCTCC AGGTCCGCAT GGAGAAGCAC
TCGGACAACG CCGAGGCGGT CGCGCAGGCC CTGTCCGCGC ACCCGAAGGT GGAGCGCGTG
CTCTACCCCG GCCTGCCCGA GCACCCCGGC CACGAGACGG CGGCCAAGCA GATGCGCCGG
TTCGGCGGCA TGGTGTCGTT CCTGGTCAAG GGCGGCGAGC AGGCCGCGCT CGACGTGTGC
GCGCGCACGA ACGTGTTCAC GCTGGCCGAG TCGCTGGGCG GCGTCGAGTC GCTGATCGAG
CACCCCGGCC GCATGACGCA CGCCAGCGTC GCGGGCACCG AGCTGGAGGT CCCGGCCTCG
CTCGTGCGGA TCTCGGTCGG CCTGGAGGAC GCGGACGACC TGATCGCCGA CCTGTCGCAG
GCCCTGGCCT GA
 
Protein sequence
MTDSGPLGFA TRAIHTGQEP DPTTGAVIPP LYATSTYAQD GVGGLRKGFE YSRTGNPTRT 
ALEQCLAALE GGRFGRAFAS GMAATDTALR SLLRPGDHLV IPNDTYGGTF RLIDKVLSQW
GVEHTPVAIS DVDAVRAAIR PNTKLVWVET PTNPLLTIAD IALLADATRD ASVTLVVDNT
FASPYLQNPL ELGADVVMHS TTKYLGGHSD LIGGALVTSD EELDTKFAFL QNGSGAVPSP
FDAWLTLRSL KTLQVRMEKH SDNAEAVAQA LSAHPKVERV LYPGLPEHPG HETAAKQMRR
FGGMVSFLVK GGEQAALDVC ARTNVFTLAE SLGGVESLIE HPGRMTHASV AGTELEVPAS
LVRISVGLED ADDLIADLSQ ALA