Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0702 |
Symbol | |
ID | 8324865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 780021 |
End bp | 781172 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644941246 |
Product | Cystathionine gamma-synthase |
Protein accession | YP_003098511 |
Protein GI | 256374851 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.558614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTGACA GCGGCCCACT CGGCTTCGCA ACGCGGGCGA TCCACACCGG ACAGGAGCCG GACCCCACCA CCGGCGCGGT CATCCCGCCG CTCTACGCCA CCTCCACCTA CGCCCAGGAC GGCGTCGGCG GGCTGCGCAA GGGCTTCGAG TACTCGCGCA CCGGCAACCC AACCCGCACC GCGCTGGAGC AGTGCCTGGC CGCGCTGGAG GGCGGCCGGT TCGGGCGGGC GTTCGCCAGC GGCATGGCCG CCACCGACAC CGCGCTGCGG TCGCTGCTGC GCCCCGGTGA CCACCTGGTC ATCCCGAACG ACACCTACGG CGGCACGTTC CGCCTCATCG ACAAGGTGCT GTCCCAGTGG GGCGTCGAGC ACACCCCCGT CGCGATCTCC GACGTGGACG CCGTGCGCGC CGCGATCCGC CCGAACACCA AGCTGGTGTG GGTCGAGACG CCGACCAACC CGCTGCTCAC CATCGCGGAC ATCGCGCTGC TGGCCGACGC CACCCGCGAC GCCTCGGTGA CGCTGGTCGT GGACAACACG TTCGCCTCGC CCTACCTGCA GAACCCCCTC GAACTGGGCG CGGACGTGGT CATGCACTCC ACGACCAAGT ACCTGGGCGG CCACTCCGAC CTCATCGGCG GCGCGCTGGT CACCTCCGAC GAGGAGCTCG ACACCAAGTT CGCGTTCCTG CAGAACGGCT CCGGCGCGGT GCCCAGCCCG TTCGACGCGT GGCTGACCCT GCGCAGCCTC AAGACCCTCC AGGTCCGCAT GGAGAAGCAC TCGGACAACG CCGAGGCGGT CGCGCAGGCC CTGTCCGCGC ACCCGAAGGT GGAGCGCGTG CTCTACCCCG GCCTGCCCGA GCACCCCGGC CACGAGACGG CGGCCAAGCA GATGCGCCGG TTCGGCGGCA TGGTGTCGTT CCTGGTCAAG GGCGGCGAGC AGGCCGCGCT CGACGTGTGC GCGCGCACGA ACGTGTTCAC GCTGGCCGAG TCGCTGGGCG GCGTCGAGTC GCTGATCGAG CACCCCGGCC GCATGACGCA CGCCAGCGTC GCGGGCACCG AGCTGGAGGT CCCGGCCTCG CTCGTGCGGA TCTCGGTCGG CCTGGAGGAC GCGGACGACC TGATCGCCGA CCTGTCGCAG GCCCTGGCCT GA
|
Protein sequence | MTDSGPLGFA TRAIHTGQEP DPTTGAVIPP LYATSTYAQD GVGGLRKGFE YSRTGNPTRT ALEQCLAALE GGRFGRAFAS GMAATDTALR SLLRPGDHLV IPNDTYGGTF RLIDKVLSQW GVEHTPVAIS DVDAVRAAIR PNTKLVWVET PTNPLLTIAD IALLADATRD ASVTLVVDNT FASPYLQNPL ELGADVVMHS TTKYLGGHSD LIGGALVTSD EELDTKFAFL QNGSGAVPSP FDAWLTLRSL KTLQVRMEKH SDNAEAVAQA LSAHPKVERV LYPGLPEHPG HETAAKQMRR FGGMVSFLVK GGEQAALDVC ARTNVFTLAE SLGGVESLIE HPGRMTHASV AGTELEVPAS LVRISVGLED ADDLIADLSQ ALA
|
| |