Gene Amir_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0680 
Symbol 
ID8324842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp755306 
End bp756304 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content72% 
IMG OID644941223 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003098489 
Protein GI256374829 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.787566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTGAAC CGGTGCTGAG CGTGCGGGAC CTGGTCAAGC ACTTCCCGGT GACCAGGGGC 
GTGCTGTTCA AGCGCGCCAT CGGCCAGGTC AAGGCGGTCG ACGGGGTCTC GTTCGACCTG 
ATGCCCGGCG AGACGCTGGG CGTGGTCGGC GAGTCCGGCT GCGGCAAGTC CACCCTCGCC 
CAGGTGCTGA TGTGCCTGGA ACCGCCCACC TCCGGCGAGG CGCGCTTCGA GGGCAGGCCG 
ATGTTCGGCC TCAAGGGCTC GGCGATGCGG TCGCTGCGGC GGGACCTGCA GATCGTGCTC 
CAGGACCCGT ACACCTCGCT CAACCCGAGG ATGACCGTCG GCGACATCGT CGGCGAGCCG 
TTCGAGATCC ACCCGGAAGT CGCGCCCGCC GGGTCGCGGG CGGCGCGGGT GCGGGAGCTG 
CTGGACGTGG TCGGGCTCAA CCCCGAGCAC GCGAACCGCT ACCCGCACCA GTTCTCCGGC 
GGGCAGCGGC AGCGCATCGG CATCGCGCGG GCGCTCGCCC TGCGACCCAA GGTGATCGTG 
TGCGACGAGC CGGTGTCCGC GCTGGACGTG TCCATCCAGG CGCAGGTGAT GAACCTGCTC 
GGGCGGTTGC AGCGCGAGTT CGGGCTGGCC TACGTGTTCA TCGCGCACGA CCTGTCGGTG 
GTGCGGCACC TGTCCGACCG GGTCGCGGTG ATGTACCTGG GCAAGTTCGT GGAGGTGGGC 
ACCGAGGACC AGATCTACGC GCACCCCACG CACCCGTACA CCCAGGCGCT GCTGTCGTCG 
GTGCCGGTGG CCGACCCGGA GCTGCGCGGC AGGCGCGAGG TGATCCGGCT GACCGGGGAC 
GTGCCGTCGC CGATCGACCC GCCGTCCGGC TGCCGGTTCC GCACCCGGTG CTGGAAGGCG 
CAGGACGTGT GCGCGACCGA GGAGCCGCCG CTGGTGGAGC GGCTCGGGCA CCTGAGCGCG 
TGCCACTTCG CCGAGGAGCG CTCGGTGGTG CCGGGCTAG
 
Protein sequence
MPEPVLSVRD LVKHFPVTRG VLFKRAIGQV KAVDGVSFDL MPGETLGVVG ESGCGKSTLA 
QVLMCLEPPT SGEARFEGRP MFGLKGSAMR SLRRDLQIVL QDPYTSLNPR MTVGDIVGEP 
FEIHPEVAPA GSRAARVREL LDVVGLNPEH ANRYPHQFSG GQRQRIGIAR ALALRPKVIV 
CDEPVSALDV SIQAQVMNLL GRLQREFGLA YVFIAHDLSV VRHLSDRVAV MYLGKFVEVG 
TEDQIYAHPT HPYTQALLSS VPVADPELRG RREVIRLTGD VPSPIDPPSG CRFRTRCWKA 
QDVCATEEPP LVERLGHLSA CHFAEERSVV PG