Gene Amir_0669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0669 
Symbol 
ID8324831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp743441 
End bp744385 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content75% 
IMG OID644941212 
Productmembrane-bound lytic murein transglycosylase B-like protein 
Protein accessionYP_003098478 
Protein GI256374818 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCGTCC CGCCGCAGTC CAAGCCCGCG CCGAACCGGC GTTCCCGCCG TGGAGCCTTC 
TTCGGCCGCT TCGTGCTGGT CCTGATCCTG CTCGGCGCCG TCGCAGGCGG CGCCTACGGC
ATCGCCATGC TGGGGCGCAC ACCCAGGGCC GAGCCCGAGC CGCCCTTCCA GGTGCCGTTC
CAGGAGCTGG AGCCGGGGAG CGCCGTGCCG AACGCCGCGG GCGAGCCCAC GGCCGCGCCC
GGCGCCTCCC CGTCCGGCTC CCAGTCCGCC TCCCCGTCCC GCTCCTCCGC GCCGTCCACC
TCGGCATCCC CCTCGGCGTC CACCTCCAGA GGGGGCGGCG ACACCTCCGC CGCCGTGGCC
GCCTGGGCCG CCGAGCTGTC CAAGAAGATC GAGGTCCCCG CGCGGGCGCT GCGCGCCTAC
GGCGAGGCCG AGCTGCTGCT GCGCGAGGAG CTGCCCCGGT GCGGCATCAC GTGGGCGACG
CTCGCGGGCA TCGGCCGCAT CGAGTCGCAC CACGGCACCA TCGGCGGGCT CAAGCTCGGC
GAGGACGGCA GGCCCAACGA GCCGATCATC GGCATCCCGC TCGACGGCGG CCCCGGCGTG
AAGGCCATCG AGGACACCGA CGGCGGCAAG CTCGACGGCG ACACCGAGTG GGACCGCGCG
GTCGGGCCGA TGCAGTTCAT CCCGACCACG TGGGCGCGCT ACGGGATGCG CGCCAGCGGG
GACGGGAAGG ACCCCGACCC GCAGAACATC GACGACGCGG CGCTCACCGC CGGGCGGTAC
CTGTGCGTCA GCGGCGGCGA GATGACCAGC GGCGCCGGGT GGTGGCGCGG GGTGATGACC
TACAACGAGT CGGTGGAGTA CGCGCGCAAC GTGTTCAGCG GCGCGGACGC GTACGCCCGC
GCGAGCGTGG GGGCTCCGGC CCCGACCGGC AAGCTGACGG GCTGA
 
Protein sequence
MVVPPQSKPA PNRRSRRGAF FGRFVLVLIL LGAVAGGAYG IAMLGRTPRA EPEPPFQVPF 
QELEPGSAVP NAAGEPTAAP GASPSGSQSA SPSRSSAPST SASPSASTSR GGGDTSAAVA
AWAAELSKKI EVPARALRAY GEAELLLREE LPRCGITWAT LAGIGRIESH HGTIGGLKLG
EDGRPNEPII GIPLDGGPGV KAIEDTDGGK LDGDTEWDRA VGPMQFIPTT WARYGMRASG
DGKDPDPQNI DDAALTAGRY LCVSGGEMTS GAGWWRGVMT YNESVEYARN VFSGADAYAR
ASVGAPAPTG KLTG