| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0657 |
|---|
| Symbol | |
|---|
| ID | 8324818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 724714 |
|---|
| End bp | 726189 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644941199 |
|---|
| Product | UDP-N-acetylglucosamine pyrophosphorylase |
|---|
| Protein accession | YP_003098466 |
|---|
| Protein GI | 256374806 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) |
|---|
| TIGRFAM ID | [TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCAGG GTGTTCCCGC CCCGGTCAGC ACTATCGTCC TCGCAGCGGG TGAGGGCACC
CGCATGCGCT CCGCCACCCC GAAGGTGCTG CACCGGCTCG CGGGCCGCTC GCTGGTCGAG
CACGCCGTGC GGGCCGCGGC GGGCGCCGAC CCCGCGCACC TGGCCGTGGT GGTCGGGCAC
GGCCGCGAGG CGGTCACCGA GCACCTGGGG GCCGTCGCGG GCGCGCTGGG GCGCGAGGTC
GTGGTCGCCG TCCAGGAGGA GCAGAAGGGC ACCGGGCACG CGGTGGGCTG CGGCCTGGCC
GAGCTGCCCG AGGACCTGAC CGGCACCGTC GTGGTCACCT ACGGCGACGT GCCGCTGCTG
GACGCGGACT CGCTGCGCGC CCTGCTCGTC GAGCACGGGG CGCGCGGCAA CGCGGCGACC
GTGCTCACGG CGGTGCTCGA CGACCCGACC GGCTACGGGC GCATCCTGCG CGACGCGGAC
GGCTCGGTCC TGGGCATCGT GGAGCAGAAG GACGCGAGCG AGGCCGAGCG GGCCATCACC
GAGATCAACT CAGGGGTGTA CGCGTTCGAC GCGGTCGTGC TGCGCGACGC CCTGTCCCGG
CTGGGCACCG ACAACGCCCA GGGCGAGCTG TACCTGACCG ACGTGCTGGG CATCGCGCGC
GGCGACGGCG GCCGGGTCGG CGCGCTGGTG ACCGGCGACC GGTGGCTGGT GGAGGGCGTC
AACGACCGGG TGCAGCTGGC CAGGCTCGGC AAGGAGCTGA ACCGGCGGCT GGTCGAGCGC
TGGATGCGCG AGGGCGTGAC CGTGGTCGAC CCGGACACCA CCTGGCTGGA CGCCGACGTG
GAGCTGGGCC GGGACGCGCT GGTGGAGCCG GGCGTGCAGC TGCGCGCGGG CACCACCGTG
GGCGAGGGCG CGGTCGTCGG GCCGGACACC ACGCTGTCCG CCTGCGCGGT CGGCGCGGGC
GCGAGCGTGG TGCGCACCCA CGGCAGCGGC TCGGTGATCG GCGCGGGCGC GAGCGTCGGC
CCGTTCGCCT TCCTGCGGCC CGGCACCAGG CTGGGCGCGG ACGGCAAGAT CGGCACGTTC
GTCGAGGTCA AGAACTCGGA GATCGGCGCG GGCAGCAAGG TGCCGCACCT GAGCTACATC
GGGGACGCGA CGATCGGCGA GCAGTCGAAC ATCGGCGCCG CCAGCGTCAC GGTCAACTAC
GACGGCGTCA CCAAGCACCG GACGGTCATC GGCTCGCACT GCCGGACCGG CTCCGACAAC
ATGTTCGTCG CCCCGGTGAC CGTGGGCGAC GGCGCTTACA CCGGCGCGGG GACCGTGCTG
CGGCGCGACG TGCCCCCCGG CGCGCTGGCC GTCTCCGGCG GTCCCCAGCG CAACCTCGCC
GACTGGGTGC TCACCCGGCG GCCCGGAACC GCCGCGGCTG ATGCCGCCGA GCGCGCCCTG
TCTCAGGTCG CGGAGAAGAA CGAGGAAGGG CGCTGA
|
|---|
| Protein sequence | MLQGVPAPVS TIVLAAGEGT RMRSATPKVL HRLAGRSLVE HAVRAAAGAD PAHLAVVVGH
GREAVTEHLG AVAGALGREV VVAVQEEQKG TGHAVGCGLA ELPEDLTGTV VVTYGDVPLL
DADSLRALLV EHGARGNAAT VLTAVLDDPT GYGRILRDAD GSVLGIVEQK DASEAERAIT
EINSGVYAFD AVVLRDALSR LGTDNAQGEL YLTDVLGIAR GDGGRVGALV TGDRWLVEGV
NDRVQLARLG KELNRRLVER WMREGVTVVD PDTTWLDADV ELGRDALVEP GVQLRAGTTV
GEGAVVGPDT TLSACAVGAG ASVVRTHGSG SVIGAGASVG PFAFLRPGTR LGADGKIGTF
VEVKNSEIGA GSKVPHLSYI GDATIGEQSN IGAASVTVNY DGVTKHRTVI GSHCRTGSDN
MFVAPVTVGD GAYTGAGTVL RRDVPPGALA VSGGPQRNLA DWVLTRRPGT AAADAAERAL
SQVAEKNEEG R
|
|---|
| |