Gene Amir_0656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0656 
Symbol 
ID8324817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp723726 
End bp724697 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content69% 
IMG OID644941198 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_003098465 
Protein GI256374805 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGGA CACCCAAGAA GAACCTGATG CTCTTCGGCG GGCGGGCCTA CCCGGAGCTG 
ACCGAGGAGG TGGCCAAGCA CCTCAACGTG TCGGTCACCC CGCAGGCCGC GTACGACTTC 
GCGAACGGCG AGATCTTCGT CCGGTTCGAG GAGTCGGTGC GCGGGTGCGA CGCGTTCGTC 
ATCCAGTCGC ACAAGGCGCC CATCAACCAG TGGCTGATGG AGCAGCTGAT CATGGTGGAC 
ACGCTGAAGC GGGCCTCCGC GAAGCGCATC ACGGTGATCA TGCCGTTCTA CCCGTACGCG 
CGGCAGGACA AGAAGCACCG GGGCCGCGAG CCGATCTCGG CCCGCCTGGT CGCCGACCTG 
TTCAAGACCG CGGGCGCGGA CCGCCTGGTG GCCGTGGACC TGCACACCGC GCAGATCCAG 
GGCTTCTTCG ACGGCCCGGT CGACCACCTG TGGGCGATGC CGCTGCTGGC CGAGCACGTG 
CGCGACAAGT ACGCGGGCCA CGACATCACC GTGGTCTCGC CGGACGCGGG GCGCACCAAG 
CTGGCGGAGA AGTGGGCGGA CACGCTCGGC GGCACGCCGA TCGCGTTCAT CCACAAGACC 
CGCGACCCGC TGCGGCCGAA CGAGGTCGTG GCGAACCGGG TGGTCGGCCA GGTCAAGGAC 
CGGCTGTGCG TGGTGATCGA CGACATGATC GACACCGGCG GCACGATCAC CAAGGCGGTG 
GACCAGCTCC TCGCCGAGGG CGCGTCCGAC GTGGTGATCG CGGCCACCCA CCCGGTGCTC 
TCGGGCCCGG CGGTGGAGCG GCTGCAGAGC TGCGGCGCGC GTGAGGTGGT GTTCACGGAC 
ACGCTGCCGA TCCCGCAGGA GAAGCGCTTC GAGGCGATGA CGGTGATCCC GATCGCGCCG 
CTGCTGGCGC GCGTGATCCA GGAGGTCTTC GAGGACGGCT CGGTCACGAG CCTGTTCGAC 
GGCAACGCGT GA
 
Protein sequence
MSGTPKKNLM LFGGRAYPEL TEEVAKHLNV SVTPQAAYDF ANGEIFVRFE ESVRGCDAFV 
IQSHKAPINQ WLMEQLIMVD TLKRASAKRI TVIMPFYPYA RQDKKHRGRE PISARLVADL 
FKTAGADRLV AVDLHTAQIQ GFFDGPVDHL WAMPLLAEHV RDKYAGHDIT VVSPDAGRTK 
LAEKWADTLG GTPIAFIHKT RDPLRPNEVV ANRVVGQVKD RLCVVIDDMI DTGGTITKAV 
DQLLAEGASD VVIAATHPVL SGPAVERLQS CGAREVVFTD TLPIPQEKRF EAMTVIPIAP 
LLARVIQEVF EDGSVTSLFD GNA