Gene Amir_0617 details

Gene Information

• Locus tag: Amir_0617
• ID: 8324777
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 680221
• End bp: 682254
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 644941158
• Product: Beta-galactosidase
• Protein accession: YP_003098426
• Protein GI: 256374766
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1874] Beta-galactosidase

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAGCT GGCCGACCGG ACTGCCGGGC CTCGCCTGGG GCGCCGACTA CAACCCTGAG 
CAGTGGCCCG AGGAGGTCTG GGACGCCGAC GTCGAGCTGA TGCGCGCGTC CGGCGTGAAC 
CTCGTGAGCC TCGGGATCTT CTCCTGGGCG CTGCTGGAGC CCCGCGAGGG CGAGCGCGAC 
TTCGCCTGGC TCGACCGGGT CATGGACCGC CTCGCCGCGG GCGGCGTCCG GGTCGACCTG 
GCCACCGCCA CCGCCGCGCC CCCGCCCTGG ATGACCACCG ACTACCCCGA GGTCCGCCCG 
GTCCGCGAGG ACGGCGTCCG CCTCACCCAC GGCTCCCGCC AGGCCTACTG CCCCACCTCC 
GAGGTCTACC GCACCCGCGC CGTCGCGCTG GCCCGCGCGC TGGCCGAGCG CTACCGCGAC 
CACCCCGCGC TGTCCGCCTG GCACGTCGGC AACGAGTACG GCTGCCACGT CCCGCGCTGC 
TACTGCGACA ACTGCGCCGA GGCGTTCCGC ACCTGGCTGC GCGAGCGCTA CGGCGACCTC 
GACGGCCTCA ACGAGGCGTG GGGCACCCTG TTCTGGTCCC AGCGCTACAG CGCGTGGGAG 
CAGGTCGTGC CGCCCCGCGT GACCCCCACG TTCGGCAACC CCGGCCAGCT GCTCGACTTC 
AACCGCTTCG CCTCCGACGC GCTCCTGGAG CTGTTCAAGG CCGAGCGCGA CGTGCTGCAC 
GAGGTCACCC CCGGCGTGCC CGTCACCACC AACTTCATGG TCGGCTGGAC CTTCGCCGAC 
CTGGACTACT GGTCGTGGGC GAAGGAGATG GACTTCGTCT CCAACGACCA CTACACCCGC 
TCCGAGGACC CCGACCGGCA CGTCGAGCTG GCCATGGCCG CCGACCTCAC TCGCGGCCTC 
GCGGGGGGCC GCCCGTGGCT GCTCATGGAG CAGTCCACCT CGGCGGTGAA CTGGCAGCCC 
CGCAACATCG CCAAGCTCCC CGGCGAGCAG CGCCGCAACT CCTTCTCGCA CGTCGCGCGC 
GGCGCCGACG GCACGCTGTT CTTCCAGTGG CGCCAGTCGA AGGCGGGCGC CGAGCGCTTC 
CACTCGGCGA TGGTCCCGCA CGGCGGCGAG GACACCCGCG TGCACCGCGA GGTGCGCCGC 
GTCGGCGGCG AGTACGCCAA GCTGACCGAG CTGCTCGGGT CCACCGTGGA CGCCTCCGTC 
GCGATCGTCT ACGACTGGCA CTCGCGCTGG TCCCTCGGCC AGGAGGCCAC CCCCACCGCC 
GACTTCTCCT ACCAGGAGAA CGTCTTCGGC CTGTACCGGG CGCTGTGGCG CTCCGGCGTC 
ACGGTCGACT TCGTGCCCTC CGGCGCGGAC CTGTCGGCGT ACAAGGCCGT CGTCGTGCCC 
TCGCTGTTCC TGCTCGACGA CGCCGAGTGG CTCACCTCCT ACACCGGCCA CCTGCTGGTC 
ACCCACCTCA CCGCGATCAC CGACACGCGC GGCCACGTGC ACCTGGGCGG CTACCCCGGC 
CTCGTCGGCG GGCTGCTCGG CGTGCGCACC GAGGAGTTCC ACCCGCTGCG CGCCGGCGAG 
GTCGTCCGGC TCGACGACGG CGGCGAGGTC GCCGTGTGGA CCGAACTGCT GCGCGCCGAG 
GGCGCCGAGG TGCTCTCCCG CTACGCCGAC GGCCCCCTCG CGGGTGAACC GGCCATCACC 
CGCAACGGCA ACGCCTGGTA CCTCGGGTGC GGTCTGCGCG GCGCGGCGCT GGAGACCCTG 
GTGTGCTCCG TGGTGGCGGA CGCGGGCGTC GAGCAGGTCC TGGTGACCGG CGAGGACGGC 
GGCGCGGACG TCGGCGCCGG TTCGGCGGGC GTCGAGGTCG TGCGCAGGCG CGGCGAGGGC 
GGCTCGTGGC TGGTCGCGAT CAACCACGGC GGCGAGCCCG CCCTGGTGCC CGCGCGCGGC 
GTGGAGCTGC TGTCCGGCGA CGACGTCGAC GGGACGCTCA CCGTCCCGGC GGGCGGCGTG 
GTCGTGGTCA GGGAAGCCGC CGCCGGGGAA CCGGCCGTCG CAGAAGGGGA GTGA 

 

Protein sequence

MTSWPTGLPG LAWGADYNPE QWPEEVWDAD VELMRASGVN LVSLGIFSWA LLEPREGERD 
FAWLDRVMDR LAAGGVRVDL ATATAAPPPW MTTDYPEVRP VREDGVRLTH GSRQAYCPTS 
EVYRTRAVAL ARALAERYRD HPALSAWHVG NEYGCHVPRC YCDNCAEAFR TWLRERYGDL 
DGLNEAWGTL FWSQRYSAWE QVVPPRVTPT FGNPGQLLDF NRFASDALLE LFKAERDVLH 
EVTPGVPVTT NFMVGWTFAD LDYWSWAKEM DFVSNDHYTR SEDPDRHVEL AMAADLTRGL 
AGGRPWLLME QSTSAVNWQP RNIAKLPGEQ RRNSFSHVAR GADGTLFFQW RQSKAGAERF 
HSAMVPHGGE DTRVHREVRR VGGEYAKLTE LLGSTVDASV AIVYDWHSRW SLGQEATPTA 
DFSYQENVFG LYRALWRSGV TVDFVPSGAD LSAYKAVVVP SLFLLDDAEW LTSYTGHLLV 
THLTAITDTR GHVHLGGYPG LVGGLLGVRT EEFHPLRAGE VVRLDDGGEV AVWTELLRAE 
GAEVLSRYAD GPLAGEPAIT RNGNAWYLGC GLRGAALETL VCSVVADAGV EQVLVTGEDG 
GADVGAGSAG VEVVRRRGEG GSWLVAINHG GEPALVPARG VELLSGDDVD GTLTVPAGGV 
VVVREAAAGE PAVAEGE