| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0561 |
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| Symbol | |
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| ID | 8324720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 607655 |
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| End bp | 611689 |
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| Gene Length | 4035 bp |
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| Protein Length | 1344 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644941105 |
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| Product | WD-40 repeat protein |
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| Protein accession | YP_003098374 |
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| Protein GI | 256374714 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0971599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGGGA ACGGTCACGG TTCGGGTCCT CGCACCGCTT TCGCCGAACG CTTCGCGCTG
CTCTACGCGG AGGCGGGCGA CCCCCCGCTC AAGCGCGTGA CCGCCTCGGT GGCCAGGTCC
CGCCGGGTCG ACGAGCAGGG CCGACCGGTG CGGGTGACCG CGCAGCGGGT GAGCGACTGG
CGCCGGGGGC GCAACGTCCC GGCCCGGTTC TCGGCACTCT CGGTAGTGCT GGAGGTGCTC
ATCGGTGAAG CCAGGAAGCA GCGGCCGACC CCGCCGATCC CCGAGCTGCA CGACCTGGAG
GCGTGGCGCG AGCTGTGGGA GCAGGCCCTC GCCAGCCCCG TCGCGGCCGT CGAGAGCGGG
CCCGCGGAAA TGCCCGAGGA AAGCGGCGTG TGCCCCTACC GGGGATTGGC CGCCTTCCAG
CCCGAGGATT CCTCCTGGTT CTTCGGCCGG GAACGCAGCA CGGCCGCCCT CGTCACCCGG
CTGGACAATT CCACGGAATA CGGCGGAATC GTTGTCCTGG TCGGCGCCTC GGGCGCCGGG
AAATCCTCGC TGGTGCGCGC CGGCCTCATT CCCTCCATCC GCGAGGGGGC GTTAGCCGAC
CCGAGCTCCG CGACCTGGCC CTCGGCCGTC ATGACACCGG GCGCGAAACC GCTCGCCGAA
TTGGTCGAGC GGGTTCCCGA GCTGTCCGCG GTCCTGCCCC CCGGCGGGCT CCCCGACGAC
CCGCCGACCG AGCGCGGCGC GGGCCCGAGG TCGCTGGGCG TGATCGACTT CGCGGAACGG
GTCAGGGCCG CTGTCGCCGA GCACGCGCGG GCGCGCGGCG GCGAGCGCCT GGTGCTGGTG
GTCGACCAGT TCGAGGAGGC CTTCACCCTC TGCGGCGACG ACGCGCAGGT CCAGCTGTTC
GTCCAGGCGC TGGCGGCGGC CTGCACCCCG GAGCGGCCGG GCGGGCACGC GCCCGCGCTG
GTCGTGCTGG GCGTGCGCGC CGACTTCTAC GGGCGCTGCC TGGCGATCCC GGAGCTGGCC
GACGCGCTCC AGGAGCGGCA GATGGTCCTG GGCCCGATGA CCTCGGCCGA GCTGCGCGAG
GCGGTGGCCA GGCCCGCGCG CGCGGCCGGG CTCCAGCTGG AGGCCGGCCT GGTCGAGCTG
ATGCTGCGCG ACCTGGGCGT GCGGGCCGGT CGGACGCCGG TGCACGGCGC GCGGGGCGCG
TACGACGCGG GCGCCCTGCC GCTGCTCTCG CACGCCCTGC TCGCCACCTG GCAGCGCAGG
CAGGCGGGCA GGCTCACCAT CGCGGGGTAC CGGGCGGCGG GCGGCATCCA GGGCGCGGTG
GCCGCCACGG CCGAGCGCGC CTGGGCCGAC CTGCCCCCGG CCGCGCAGGG CGCCGCGCGC
CCGCTGCTGC TGCGCCTGGT GCGGATCGGC GCGGACACCC ACGACACCCG CCGCCGCTCC
ACCCGGCAGG AGCTGGTGGG CCAGGCGGGC GACCCGGCCG CCGCCGAGGA GGCCCTGGAG
GTGCTGGCCC GCGCCCGGCT GGTCACCCTC GACGCGGGCT CGGTGGAGAT CACCCACGAG
GCGCTGATCC AGGCGTGGCC GAGGCTGCGC GGCTGGATCG ACCAGGACCG GGAGGGCGAG
CTGCTGCGGC AGCGGCTGGA GGAGGACGCG GCGGCCTGGG CCGAGCAGGG CCGGGACTCC
TCGCTGCTGT ACCGGGGCGC GCGGCTGGAG GCGGCCAGGC ACTGGGCGAC CAGGCACCGG
GCGGACGGCG CGGGCCCGAC CGGCGCCACC GGCGACTTCC TCGCGGTGTC CGGCCAGCAC
CACCGGCGCG GGGTGTGGGC GCTGCGCGGC GGGGCCGCGC TGGTGGTGGT GCTCGCGCTG
ATCGCCGGGG TCGCGGCCGT GGTGGCGGTG CGCCAGCGCG ACGACGCGGT GTTCCGGCAG
GTCGTGGCCG AGGCCGACAA GCTGCTCGAC CGCGACCCGT CGCTGTCCGC GCAGCTGGCG
CTGGTCGCGC GCGGGATGCG GCCGTCCGCG CTCGACCTGG GCACCCGGCT GATCTCCTCC
GGCGGCGCGC CGCTGGCCAC CCCGCTGACC GGGCACACCG GCGCGGTCTA CCTGACCACG
TTCTCCCCGG ACGGCCGCAC CCTGGCCACC GCCAGCTACG ACCGCACCGT GCGGCTGTGG
GACGTCACCG ACCGGGACGA CCCGAAACCG CTGGGCGAGC CGCTGACCGG GCACGGCGAC
TGGGTCAGCT CCGCCGTGTT CTCCCCCGAC GGCCGCACGC TCGCGTCGGC GGGCAAGGAC
GGCTCGGTCC GGCTGTGGGA CGTCGCCGAC CGGGCGCGCC CCAGGCAGCT GAGCACCGCG
GAGTCCCCCG GCAGGGACAC CGTCTACCTG GTCGCGTTCT CCCCGGACGG CCGCACGCTC
GCGTCCGCGC ACGCCGACCG CGCGGTGCGG CTGTGGGACG TCACCGACCC GAGCGCCCCG
AAGCAGGTCG CGGAGCTGGC CGGGCACGGG CAGCAGGTGC GCACCGTGGC CTTCTCCCCC
ACCGGGCTGC TGGCCTCCGG CTCGGACGAC GCGACCGTGC GGCTGTGGGA CGTGGCGGAC
CCGAGCGCGC CGAGGCAGGC CGGGGAGCCG CTGGGCGGGT TCGACAGCAC GGTGCACTCG
GTCGCGTTCT CCCCCGACGG CCGCACCCTC GCCGCGGGCA GCGAGGACCG CAGCATCCGG
CTGTGGGACG TCACCGACCC GGCCGCCCCC GAGGCGCGCG GCAGGCCGCT GGCGCTGCAC
CTGGCCCCGG TGTGGTCGGT CGCGTTCTCC CCGGACGGGC GGGTGCTGGC CTCGGGCGCG
GCGGACAGCA CGGCGCGGCT GTGGAACGTC ACCGACCCGG CGCGGGTCCA GCCGCTGGGC
AAGCCGCTGG CGGGCCGCAG CGGCACGGTG TTCGCGGTCG GGTTCTCCCC CGACGGCCGC
GCGCTGGCCA CCGGCAGCCT GGACCCGGTG GTGCGGATGT GGTCGCTGCC GTCGACGGTG
CTGGTCGGGC ACGCCGCCCG CACGGTCGGC CCCCGGTTCG CCCCGGACGG GCGCGCGCTG
CTGACCGGCA GCGAGGACGG CACGGTGCGC GCGTGGGACC TGGCCGGTCC CGGCGGCCCG
GACGCGCCCA CCCCGATCGG CGACCGGCGG GACGCGGGCG AGCCGGTGCG GGCGGTGGTG
CTGGGCGAGG ACGGCCGCAC GATGGTCACG GCGGGCCCGA AGGCGGTGCG GCTGTGGGAC
GTGCGGCCGG GCGCGGAGCC GGAACCGCTG GGCGAGCCGC TGCCGCTGCG CACCCGGTTC
AGCTCGCCGC TGGCGCTGCG CGGGAACCTG CTGGTCACGG CGGACGAGGA CGACACCGTC
CTGCTGTGGG ACCTGTCCGA CCGGGCGCGC CCCAGGCAGC TGGGCGAGCC GCTGACCGGG
CACGACGGGT ACGTGAACGT CGCGCTGCTC ACCCCGGACG GCCGGTTCCT GGTGACCGGC
AGCGCCGACA GCGCGCTGCG GGTGTGGGAC GTGTCGGACC CGGCGCGCCC GAGGGCGGCG
GGCCGGTTCC CCGGCCACGA CGGCCCGGTG CGGGCGGGCG CGCTGTCCCC GGACGGGCGG
GTGCTGGCGA CGGCGGGCGA CGACAAGCTG GTGCGGCTGT GGGACTTCTC GGACCCGACC
GCGCCGAGGG CGCTGGGAGC GCCGCTGGCC GGGCACGAGG AGGCCGTGGT GGCGGTGGTG
TTCACCCCCG ACGGGCGCAC CCTGGCCAGC GGCGGCGAGG ACGCGCGGCT GCGGCTGTGG
GACACCTCGG CCCCCGCGCT GGCCCGGCCG ATCGGCGAGG GCGTGGTCGG GCACGACTCG
GCGCTGCGGG ACATCTCGGT GAGCCCGGAC GGCTCGGTGG TGGCGACCAG CTCGGCCGAC
GGCACGGTGC GGCTGTGGCA CCTGGACGCG GACTGGGCCC GCAGGCGGAT CTGCGCGCGG
ACCGGGGGCG TGCTGACCGA GGACGCCTGG CGGGAGCACG TCCCGCAGCT GGACTACGCG
CCCCCGTGCA GGTAG
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| Protein sequence | MVGNGHGSGP RTAFAERFAL LYAEAGDPPL KRVTASVARS RRVDEQGRPV RVTAQRVSDW
RRGRNVPARF SALSVVLEVL IGEARKQRPT PPIPELHDLE AWRELWEQAL ASPVAAVESG
PAEMPEESGV CPYRGLAAFQ PEDSSWFFGR ERSTAALVTR LDNSTEYGGI VVLVGASGAG
KSSLVRAGLI PSIREGALAD PSSATWPSAV MTPGAKPLAE LVERVPELSA VLPPGGLPDD
PPTERGAGPR SLGVIDFAER VRAAVAEHAR ARGGERLVLV VDQFEEAFTL CGDDAQVQLF
VQALAAACTP ERPGGHAPAL VVLGVRADFY GRCLAIPELA DALQERQMVL GPMTSAELRE
AVARPARAAG LQLEAGLVEL MLRDLGVRAG RTPVHGARGA YDAGALPLLS HALLATWQRR
QAGRLTIAGY RAAGGIQGAV AATAERAWAD LPPAAQGAAR PLLLRLVRIG ADTHDTRRRS
TRQELVGQAG DPAAAEEALE VLARARLVTL DAGSVEITHE ALIQAWPRLR GWIDQDREGE
LLRQRLEEDA AAWAEQGRDS SLLYRGARLE AARHWATRHR ADGAGPTGAT GDFLAVSGQH
HRRGVWALRG GAALVVVLAL IAGVAAVVAV RQRDDAVFRQ VVAEADKLLD RDPSLSAQLA
LVARGMRPSA LDLGTRLISS GGAPLATPLT GHTGAVYLTT FSPDGRTLAT ASYDRTVRLW
DVTDRDDPKP LGEPLTGHGD WVSSAVFSPD GRTLASAGKD GSVRLWDVAD RARPRQLSTA
ESPGRDTVYL VAFSPDGRTL ASAHADRAVR LWDVTDPSAP KQVAELAGHG QQVRTVAFSP
TGLLASGSDD ATVRLWDVAD PSAPRQAGEP LGGFDSTVHS VAFSPDGRTL AAGSEDRSIR
LWDVTDPAAP EARGRPLALH LAPVWSVAFS PDGRVLASGA ADSTARLWNV TDPARVQPLG
KPLAGRSGTV FAVGFSPDGR ALATGSLDPV VRMWSLPSTV LVGHAARTVG PRFAPDGRAL
LTGSEDGTVR AWDLAGPGGP DAPTPIGDRR DAGEPVRAVV LGEDGRTMVT AGPKAVRLWD
VRPGAEPEPL GEPLPLRTRF SSPLALRGNL LVTADEDDTV LLWDLSDRAR PRQLGEPLTG
HDGYVNVALL TPDGRFLVTG SADSALRVWD VSDPARPRAA GRFPGHDGPV RAGALSPDGR
VLATAGDDKL VRLWDFSDPT APRALGAPLA GHEEAVVAVV FTPDGRTLAS GGEDARLRLW
DTSAPALARP IGEGVVGHDS ALRDISVSPD GSVVATSSAD GTVRLWHLDA DWARRRICAR
TGGVLTEDAW REHVPQLDYA PPCR
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