| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0559 |
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| Symbol | |
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| ID | 8324718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 604441 |
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| End bp | 606807 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644941103 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003098372 |
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| Protein GI | 256374712 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACTC CCCCCAAGCC CGTCCTGGAC ACCGCGGCCC GCGCCCTGCT CGACGAGATC
GCCGCGAACC CCGGCGCGGT CCTGCGCCTC GGCGTGCTCG CGCCCGGCGG GCACGGGAAG
ACCACCCTGC TGCGCGAGGT CGAGCGGGCC CTCGCGCAGA ACGGCGCCGA CGTCACCGCC
GTGGACGACG CGCACCTGCT CGGCGACGAC GAGCTGCGCG CCCTGCGCGC CCTGGTCGAG
CGCGGCGACA CCTCCGTCGT CGTCGCCTAC CGGCCGTGGC CGCGCTCCCG CGCGCTGGCC
GCCCTCGCCG AGTCCCTCGG CCGCGTCCGC CCCGCCCACC TGCCCGCCCC GCTCACCCGC
GAGCAGGTCA GGCACGCCCT GCCCCCGTCC ACCGGCCGCG CCCTGGTCGA CTTCGTCCAC
CAGCAGACCG GCGGCGTGCC CCGCTTCGTC GCCCGGCTCT CCGGGCTGAC CTCGCCGGAG
CTGACCCCGG ACGTCATCGC CTCCTTCCGC GCCGACCTGG ACTGGCTCGA CCCGGACGCC
CAGAAGTTCC TCCTCGCCGC CGAGGCCGGG GCCGCCCTGC GCCTGGACCT GCTGCGCTCG
CTGCTCGGCG GGGACGCCGA CCGGGTCGCC GACGTCATCG ACGCCGCCCG CGCCACCGGC
CTGCTCGCCC CCGACGGCAC CCTGCTGCCG GTGGCCCGCA CCGCCGTGGC CGCCCTCAGC
CGCACCGACC GGCGCATCGC CGTGCGCCGC GCGCTGGCCG AGTCCCAGCT GCGCGCGGGC
GGCCCCGTGC TCGACCTGGT CCGGCCGCTG CTCACCGCCC CCGGCCCGGA GCTGTCCGAG
CTGTTCAAGG CCGCCGCCGC CGAGGCCCTG CCCAGCGACC CGGCGCTCGC CGCCCGGCTG
CTCGCCGCCA TCGGCACCCC CACCCCCGAG GTGGCCGTCC GGCACGCCAC CGCCTCCGCC
ATGGCGGGCG ACCTGGACTC CGCGCTGCGC CTGGCCGACC GGGTCGTCGC GGCGGGCGAC
CAGACCCACC GGGGCGCCGC CGCCGAGGTC GCGGCCATCG CGCTCGCCCA CCGCGGCCAG
CTCGCCCGCA GCACCGAGCT GCACCGCTGG TCGCCCAGCG CCACCTCCAC CGCGTTCGCG
CACATCGGCC AGATCGGCGT CGGCGCGCTC CCGGCCGCGC CGCTGCCGCC CGCCCCGCCC
ACCCTGCTCG GCGGAGCCGC CTCGCTGATG GCGCACGGTG TCCTCGAATC GGTCACCGGC
AGCCCCACCA CCGCGCTGTC CACCCTGGTC AGGGCCTCGG GACTGCTGGA ACCGGCGGGC
GCGGGCGTGC TGCTGCCCGA CTCGCCCGCC GCCCTCGCCG CGCTGGTCGC GCTGCACAGC
GGCGAGCCGG TGGTCGCCGA GTCCGCGCTC GACCGCGCCG TCGCCTCCGG CCTCGGCGGC
TCGCTCATGG CCGTGCGGCA CCGGCTGCTG CGCGCCTGGA TCGCCATGGG CCGGGGCAAC
CTGGAGCGCG CCCGCGAGAC GATCACCGCG CTGCGCAGGG CGAACCGGCC CCTGGAACCC
CGCGACTGGA TCTTCGCGGT GGCGCTGGAG ATCGGCATCG CCCGCCGCAA CAGCGACCTG
CCCACCCTCA AGCGCACTTG GGAGCAGGCC TGCGAGGCGG TGCTGCGCCA CCCCGTCGAC
CTGTACACGT TCCTGCCGCT GGGCGAGTTC GCCGCAGCCG CCGCCCGGCT GCGCGACCAG
CACCGCCTCG CCCCGCACCT GGCCGCCGCC GAGGACCTGC TGCGCGGCCT CGGCAACCCC
GCGCTGTGGG CGGTGCCGCT GCACTGGAGC GGCCTGCACG CCGCCGTCAT CGCCGAGGAG
ATCCCGGCCG CCGAGGAGCA CGCCGCCGCG CTCGCCGCCC ACCGCGACTC GGGCCGCTAC
TGCGCGATCG TCTCCAGCGC CGCCGAGAGC TGGCTCGACG TGCTCGCGGG CAAGGTCGAC
CCCGACCAGG TCGAGCGGGC CGCGCGCGGG CTGCACGCGG CGGGCCAGTG GTGGGACGCC
GCCCGCCTCG CGGGCCAGGC CGCCATCCGC ACCTCCGACC GGCAGGCCAT GGTCCGGCTG
CTCGACTGCG CGCGGCTGCT CCAGGGCAGG CCGCTGGGCG GGCGCAAGCC GGTCGAGCCC
GAGACCGGGC AGGAGACCGG CAAGCTCAGC GACCGCGAGC GCGAGGTCGC CGAGCTGGTC
GTCGGCGGGC TCACCTACAA GCAGGTGGGC GACCGGCTGT TCATCTCCGC CAAGACCGTC
GAGCACCACG TGGCCCGCAT CAGGCAGCGC CTGGGCTGCA CCAGCCGCGC GGAGCTGCTC
GACCAGCTCC GCCAGATCGT CGGCTGA
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| Protein sequence | MTTPPKPVLD TAARALLDEI AANPGAVLRL GVLAPGGHGK TTLLREVERA LAQNGADVTA
VDDAHLLGDD ELRALRALVE RGDTSVVVAY RPWPRSRALA ALAESLGRVR PAHLPAPLTR
EQVRHALPPS TGRALVDFVH QQTGGVPRFV ARLSGLTSPE LTPDVIASFR ADLDWLDPDA
QKFLLAAEAG AALRLDLLRS LLGGDADRVA DVIDAARATG LLAPDGTLLP VARTAVAALS
RTDRRIAVRR ALAESQLRAG GPVLDLVRPL LTAPGPELSE LFKAAAAEAL PSDPALAARL
LAAIGTPTPE VAVRHATASA MAGDLDSALR LADRVVAAGD QTHRGAAAEV AAIALAHRGQ
LARSTELHRW SPSATSTAFA HIGQIGVGAL PAAPLPPAPP TLLGGAASLM AHGVLESVTG
SPTTALSTLV RASGLLEPAG AGVLLPDSPA ALAALVALHS GEPVVAESAL DRAVASGLGG
SLMAVRHRLL RAWIAMGRGN LERARETITA LRRANRPLEP RDWIFAVALE IGIARRNSDL
PTLKRTWEQA CEAVLRHPVD LYTFLPLGEF AAAAARLRDQ HRLAPHLAAA EDLLRGLGNP
ALWAVPLHWS GLHAAVIAEE IPAAEEHAAA LAAHRDSGRY CAIVSSAAES WLDVLAGKVD
PDQVERAARG LHAAGQWWDA ARLAGQAAIR TSDRQAMVRL LDCARLLQGR PLGGRKPVEP
ETGQETGKLS DREREVAELV VGGLTYKQVG DRLFISAKTV EHHVARIRQR LGCTSRAELL
DQLRQIVG
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