| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0556 |
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| Symbol | |
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| ID | 8324715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 600103 |
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| End bp | 601911 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644941100 |
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| Product | GTP-binding protein HSR1-related |
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| Protein accession | YP_003098369 |
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| Protein GI | 256374709 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0699] Predicted GTPases (dynamin-related) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0329351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCTC CGTGGCTCGA CGTGCTCGAC GACACGATCA GGGCCTGCGC CGCCCGCAAC
CGCCCCGACC TGGCCGCCAG GCTGCGCGAG AAGCGCGCGA GCCAGCTGGA CCCGAGGATC
CGGGTGCTCG TCGTCGGCGA GTCCAAGCAG GGCAAGAGCC AGCTGGTGAA CGCGCTGATC
AACGCGCCGG TGTGCGCGGT CGGCGACGAC GTGACGACGG CCGTGCCCAC GTTCGTGCAG
CACGCCGAGA CGCCGTCCGC GACGCTGCTG CGCGGCGGGT CGATCGCGGA CACCCCGACC
GAGCGCATCC CGGTGCCCAT CGACCAGGTG GCGCGCGCGG TGAGCGGGCG CGCGGGCGGC
GAGGTGCTGG CGGCCGAGGT CGGCATCCCG CGCGAGCTGC TGGCGTCCGG GCTGGTGCTG
ATCGACACCC CCGGCACCGG GGACCCGCGC GGGGCGCGCG CGGCCAGCAC CTACGCGGCG
CTGCTCCAGG CCGACGCGGT GCTGATGGTC ACCGACGCGA CCGCCGAGCT GTCGGCGTCC
GAGCTGGAGC TGCTGCGCCG GGTCCTGGCG GCCTGCCCGA ACGTGACCGT GGTGCTGACC
AAGACCGACC TCTCCGCGCA GTGGCGGCAG GTGCTCCAGC GCGATCGCGC GCACCTCGCG
CGCGCCGGGG TGGGCGCGAA GGTGCTGCCG GTGTCCTCGG CGCTGCGGCT GCGCGCGGCC
AGGACCGGCG ACCGGGAGCT GAACGCCGAG TCCGGGTTCC CGGAGCTGCT GGCGTGCGTG
CAGCGCGACA TCGTGGCGGC GGCGGACGTG CTCGGCCGCC GGTCGGTGGC CGCGGCGGCG
GCGTCGGCGG TCAAGCAGCT GGTGGCCCCG CTCAAGGAGG AGCTGGCCAG CATGGGGGCG
CGCGGCCCCG AGGACACGAT CGCCGCGCTG CACGAGGCGC AGCGGCGGGT GGACGAGCTG
CGGCGGCGGT CCGCGCGGTG GCAGACCGTG CTCGCCGACG AGATGGCCGA CCTGGTGTCG
GACGTGGAGT ACGACCTGCG GGACCGGACC AGGGGCATCC TGCGGGAGGT CGACCGCACC
TTCGAGACCG CCGATCCGGG GAAGGTCTGG GACGAGTTCG AGCCGTGGCT GCGCACCAGC
CTGACCGAGG CGGCGACGAC GAACTTCGCG TGGCTGCTGG AGCGGGCCGA GTGGGTCGCG
GAGAAGGTGG CGCGCAGCTT CCCGGTGCAC CGGGACGACC TGCTGCCCGA GTCGGTGTTC
CCCGACGACC TGCTCGACCG GGTGGCGGAG ATGGACGCGC CCACGTTGGA GCGGTTCACC
GCGAGCCAGA AGTTCTTCAC CGGGCTGCGC GGGTCGTACG GGGGCGTGCT GATGCTCGGG
CTGGTGACCA GCCTGGCCGG GATGCCGCTG ATCAACGCGG TGTCGCTCGG CGCGGGGGCG
CTGTTCGGCG GGCGGTCGGT GCTGGAGGAG GGCGAGCAGC GGCTCAAGCG TCGGCAGGCC
GCCGCGAAGC AGTCCGTGCA GCGGCACGTG GACGACTTCT TCGTGAAGTT CAGCAAGGAC
TGCCGGGACG CGGCGCGGCA CGTGCAGCGG AGCCTGCGCG ACCACTTCAG CACCATCGCC
GAGGAGCTGC AGGAGACGCT GCTGGAGTCG GCGCGCAGCG CGCGGCGGGC GGTGCAGGAC
GACGCGACCG AGCGGGAGCG GCGCACGCGC GAGGCCAAGG GCGAGCTGGA CGGGCTGGTG
CAGCTGTACC AGCGGGTGCA GGCGGTGGCC GGGGTCGGCG CGGCGACCCC GCTGAGCATC
ACGGCGTAG
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| Protein sequence | MSAPWLDVLD DTIRACAARN RPDLAARLRE KRASQLDPRI RVLVVGESKQ GKSQLVNALI
NAPVCAVGDD VTTAVPTFVQ HAETPSATLL RGGSIADTPT ERIPVPIDQV ARAVSGRAGG
EVLAAEVGIP RELLASGLVL IDTPGTGDPR GARAASTYAA LLQADAVLMV TDATAELSAS
ELELLRRVLA ACPNVTVVLT KTDLSAQWRQ VLQRDRAHLA RAGVGAKVLP VSSALRLRAA
RTGDRELNAE SGFPELLACV QRDIVAAADV LGRRSVAAAA ASAVKQLVAP LKEELASMGA
RGPEDTIAAL HEAQRRVDEL RRRSARWQTV LADEMADLVS DVEYDLRDRT RGILREVDRT
FETADPGKVW DEFEPWLRTS LTEAATTNFA WLLERAEWVA EKVARSFPVH RDDLLPESVF
PDDLLDRVAE MDAPTLERFT ASQKFFTGLR GSYGGVLMLG LVTSLAGMPL INAVSLGAGA
LFGGRSVLEE GEQRLKRRQA AAKQSVQRHV DDFFVKFSKD CRDAARHVQR SLRDHFSTIA
EELQETLLES ARSARRAVQD DATERERRTR EAKGELDGLV QLYQRVQAVA GVGAATPLSI
TA
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