Gene Amir_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0552 
Symbol 
ID8324711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp595883 
End bp596269 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content73% 
IMG OID644941096 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003098365 
Protein GI256374705 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.328618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGGCA TGGCGACGAC GGGTGACGTG TACGACCGCA ACTGCCCCTC CCGGCAGATC 
GCCAGCCACG CCACGAGCCA GTGGGGCGGG CTGGTCCTCG GCAAGCTCCT GGAGGGCAAG
CTGCGGTTCA GCGAGCTGCG CAGGGCGGTC GTGGGCGTCA GCGAGAAGAT GCTGGCCCAG
ACCCTGCAGG CGCTGGAGCG CGACGGCCTG GTGCTGCGCG AGGTCCACCC GGTCATCCCC
CCGCACGTCG ACTACTCCCT CACCCCGGCG GGCGCGCAGC TCGCCGCGCG GGTGCGCGGC
CTCTACGACT GGATCGAGGA CAACCTCCCC GACCTGTGCG CCGCCAGGGA CGCCTACGAC
GCCAAGCGCG CGGGGACCAC CGTGTGA
 
Protein sequence
MDGMATTGDV YDRNCPSRQI ASHATSQWGG LVLGKLLEGK LRFSELRRAV VGVSEKMLAQ 
TLQALERDGL VLREVHPVIP PHVDYSLTPA GAQLAARVRG LYDWIEDNLP DLCAARDAYD
AKRAGTTV