Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0552 |
Symbol | |
ID | 8324711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 595883 |
End bp | 596269 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644941096 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003098365 |
Protein GI | 256374705 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.328618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACGGCA TGGCGACGAC GGGTGACGTG TACGACCGCA ACTGCCCCTC CCGGCAGATC GCCAGCCACG CCACGAGCCA GTGGGGCGGG CTGGTCCTCG GCAAGCTCCT GGAGGGCAAG CTGCGGTTCA GCGAGCTGCG CAGGGCGGTC GTGGGCGTCA GCGAGAAGAT GCTGGCCCAG ACCCTGCAGG CGCTGGAGCG CGACGGCCTG GTGCTGCGCG AGGTCCACCC GGTCATCCCC CCGCACGTCG ACTACTCCCT CACCCCGGCG GGCGCGCAGC TCGCCGCGCG GGTGCGCGGC CTCTACGACT GGATCGAGGA CAACCTCCCC GACCTGTGCG CCGCCAGGGA CGCCTACGAC GCCAAGCGCG CGGGGACCAC CGTGTGA
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Protein sequence | MDGMATTGDV YDRNCPSRQI ASHATSQWGG LVLGKLLEGK LRFSELRRAV VGVSEKMLAQ TLQALERDGL VLREVHPVIP PHVDYSLTPA GAQLAARVRG LYDWIEDNLP DLCAARDAYD AKRAGTTV
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