Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0551 |
Symbol | |
ID | 8324710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 594981 |
End bp | 595796 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644941095 |
Product | NmrA family protein |
Protein accession | YP_003098364 |
Protein GI | 256374704 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACGC TGATCACCGG GGCCACCGGC CACCTGGGCG CCCTCATCGC CGACCACGTC CTCACCCGCA TCCCGGCCTC GGAGCTGGCC GTCTCGACCC GCTCGCCGGA GAAGGCCGAG GCGCTCTCCG CTCGCGGGGT CGACGTGCGC AAGGCCGACT TCGACGACGC CGAGTCCCTG CGCGCGGCGT TCGCGGGCGT GGACCGGCTC GTGCTGGTGT CGGCGGACGG GCCGGACCGG ATCGCCCAGC ACACCCGCGT GGTCGAGGCC GCCAAGGCCG CGGGTGTCTC GTTCATCGCC TACACGAGCG TGGTGGACGC CGACACGTCC ACGCTCTCCC TCGCCCCCGA CCACGCGGCG ACCGAGCGGG TCATCCGCGA GTCCGGGATC GCGTTCGCGT TCCTGCGCAA CGGCATGTAC CACGAGAACT ACACCCAGGC GCTGGGCCAC GGGGTCGTCG CGCACGCCGC CGGTGACGGC CGCAACGCCA GCGCCTCCCG CCACGACCTG GCCGAGGCCG CCGCGGTCGT CGTCACCGGC GAGGGCCACG AGGGCAAGGT CTACGAGCTG ACCGGGCCGA GCGCGTGGAC GTTCGCCGAG CTGGCCGCGC TGGCGGGCGA CGAGGCGAAG CCGGTGACGG CGCAGGAGCG GATCGCCGGG CTGGTCGGGT TCGGGCTGCC CGACTTCGTG GCGGAGCTGC TGACCGACAT CGAGGTCAAC ATCGGGCGGG GCGCGCTGGA GCGCGTCACC GACGACCTGC CGACCCTGCT GGGCCGCCCG GCCACCCCGA TCGCCGAGGC GGTCGCGAAC CGCTGA
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Protein sequence | MTTLITGATG HLGALIADHV LTRIPASELA VSTRSPEKAE ALSARGVDVR KADFDDAESL RAAFAGVDRL VLVSADGPDR IAQHTRVVEA AKAAGVSFIA YTSVVDADTS TLSLAPDHAA TERVIRESGI AFAFLRNGMY HENYTQALGH GVVAHAAGDG RNASASRHDL AEAAAVVVTG EGHEGKVYEL TGPSAWTFAE LAALAGDEAK PVTAQERIAG LVGFGLPDFV AELLTDIEVN IGRGALERVT DDLPTLLGRP ATPIAEAVAN R
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