| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0524 |
|---|
| Symbol | |
|---|
| ID | 8324683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 565670 |
|---|
| End bp | 566863 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644941068 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_003098337 |
|---|
| Protein GI | 256374677 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCG CTATCACGGG TGGGTACGTC GTCCCGGTCA TCGGTGAGCC GATCGAGAAC
GGGACCGTGC TGGTCATCGA CGGGAAGATC GCCGCGGTCG GCGCCTCGGT GGAGGTGCCC
GACGGCGTGC CCACCGTGGA CGCGAAGGGG TCCTGGGTCC TGCCCGGCTT CGTGGAGGCC
CACGGCCACA TCGGCGTCCA CGAGGAGGCC GAGGGCTGGG CGGGCCAGGA CACCAACGAG
ATGACCGACC CCAACGGCGC CCGCCTGCGC GCACTGGACG CCATCAACCC GGCCGACATG
GGCTTCGCCG ACGCCCTCTC CGGCGGCGTC ACCACCGCCG TCATCAAGCC CGGCTCCGGC
AACCCCATCG GCGGCCAGAC CGTCGCGATC AAGTGCTGGG GCCGCACCAC CGACGAGATG
CTCGTGCGCG AGCCCATCAG CGTGAAGAGC GCCCTCGGCG AGAACCCCAA GCGCGTCTAC
GGCGACCAGA AGAAGCTGCC CTCCACCCGG CAGGGCGTCG CCGCCGTCAT CCGCGACGCG
TTCACCGCCG CCCAGGACTA CGTCGCCAGG CGCGACGCCG CCGAGGGCCC GTTCGACCGC
AACCCCACCC ACGAGGTGCT CGCCAAGGTC CTGTCCGGCG AGCTGCCCTG GTGCCAGCAC
TGCCACCGCG CCGACGACAT CGCCACCGCC CTGCGCCTGG CCGACGAGTT CGGCTACCGG
CTCGTGATCA ACCACGGCAC CGAGGGCCAC CTCGTCGCCG ACCTGATCGC CGAGCGCGGC
GTCCCGGTCA TCGTCGGCCC GCTGTTCACC ACCCGCTCCA AGGTCGAGCT GCGCCAGCGC
ACCCTGCGCA CCCCCGGCGT GCTGGCCCGC GCGGGCGTCA AGGTCGCCAT CACCACCGAC
CACCCGGTGA TCCCGATCAA CTTCCTGGTG CACCAGGCCA CCCTCGCGGT CAAGGAGGGC
ATGGACCGGA CCGCCGCGCT GGAGTCCATC ACCACCAACC CGGCCGCCAT CCTCGGCCTG
GACGACCGGG TGGGCGCGCT CAAGCCCGGC CTGGACGGCG ACGTGGTCAT CTGGTCCGGC
GACCCGCTCG ACGTGATGAG CCGCGCCACG AAGGTGTTCG TCAGCGGTCG CGAGGTCTAC
TCCTACGAGG ACGGCGAGGG CAAGGTCGCC GACCCGTTCT ACCGCGAGGG CTGA
|
|---|
| Protein sequence | MSVAITGGYV VPVIGEPIEN GTVLVIDGKI AAVGASVEVP DGVPTVDAKG SWVLPGFVEA
HGHIGVHEEA EGWAGQDTNE MTDPNGARLR ALDAINPADM GFADALSGGV TTAVIKPGSG
NPIGGQTVAI KCWGRTTDEM LVREPISVKS ALGENPKRVY GDQKKLPSTR QGVAAVIRDA
FTAAQDYVAR RDAAEGPFDR NPTHEVLAKV LSGELPWCQH CHRADDIATA LRLADEFGYR
LVINHGTEGH LVADLIAERG VPVIVGPLFT TRSKVELRQR TLRTPGVLAR AGVKVAITTD
HPVIPINFLV HQATLAVKEG MDRTAALESI TTNPAAILGL DDRVGALKPG LDGDVVIWSG
DPLDVMSRAT KVFVSGREVY SYEDGEGKVA DPFYREG
|
|---|
| |