Gene Amir_0521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0521 
Symbol 
ID8324680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp562328 
End bp562894 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content77% 
IMG OID644941065 
Productregulatory protein TetR 
Protein accessionYP_003098334 
Protein GI256374674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.368507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGAA GGGGAGCCGA GCTGGAGCGC GCGGTGCTCG ACGCCGCCAC CGCCGAGCTG 
CTGGAGTCCG GGTACCGGGC GCTCACCATG GAGCGCGTCG CCAAGCGGGC GGGCACCAAC 
AAGAACGCCC TCTACCGCCG CTGGCCGCAC CGCGCCGCGC TCGCCGCCGC CGCGTACCGC 
GCGCTCGTCG CCGACACCAC CCGCACCCCG GACACCGGCG ACCTGCGCGC CGACGTGCTC 
GCCCTGCTCC GCGGCCTGGC CGCCGACCTG GCCTCGCCCC GCGGCGAGGT GCTCACCGGC 
ATGGTCGCGG GCATCGCCGC CGAGGCGCCC GAGCTGCTGG CCGAACTGCG CGAGCTGGGC 
GCGCAGGCCG GTTCCGGGGT GTGGCTGACC GTCCTCGGGC GGGCCGTCGC GCGCGGCGAG 
GCCAGGCCGG AGGCGCTGCT GCCCAGGGTC GCGGGACTGC CGCTCGTGCT GCTGCGCAAC 
GAGTTCCTGA CCGGCGGTCC CCCCACCGAC GAGGCGCTCG TGGAGATCGT CGACCAGGTC 
TACCTGCCGC TGGTGCGCGT CAGGTAG
 
Protein sequence
MRRRGAELER AVLDAATAEL LESGYRALTM ERVAKRAGTN KNALYRRWPH RAALAAAAYR 
ALVADTTRTP DTGDLRADVL ALLRGLAADL ASPRGEVLTG MVAGIAAEAP ELLAELRELG 
AQAGSGVWLT VLGRAVARGE ARPEALLPRV AGLPLVLLRN EFLTGGPPTD EALVEIVDQV 
YLPLVRVR