| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0514 |
|---|
| Symbol | |
|---|
| ID | 8324673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 553647 |
|---|
| End bp | 554780 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644941058 |
|---|
| Product | phosphoserine aminotransferase |
|---|
| Protein accession | YP_003098327 |
|---|
| Protein GI | 256374667 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1932] Phosphoserine aminotransferase |
|---|
| TIGRFAM ID | [TIGR01366] phosphoserine aminotransferase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0238654 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGA CCGCCGACCC GACCTCACTG GTCCTGCCCG CCGACCTGAA GCCGTCCGAC
GGCAGGTTCG GCTGCGGCCC GTCCAAGGTC CGGCCCGAGG CGCTGCGCGC CCTTGCCGCC
GAGGGCGCGG ACCTGATGGG GACCTCCCAC CGGCAGAAGC CGGTGAAGTC CCTCGTGGGC
GAGGTCCGCT CCGGTCTGCG CGCGCTGTTC TCCCTCCCCG AGGGCTACGA GGTCGTCCTG
GGCAACGGCG GCACCACCGC CTTCTGGGAC GCCGCCGCGT TCGGCCTGGT GCGCGAGCGC
TCGCAGCACT TCACCTACGG CGAGTTCTCC TCGAAGTTCG CCAAGGTCAC CAAGGACGCC
CCGTTCCTGG GCGAGCCGGT CGTGGTGAAG TCCGAGCCCG GCACCGCCCC CGAGATCACC
TTCGCCGAGG GCGTCGACCT GGTCGGCTGG GCGCACAACG AGACCTCCAC CGGCGTGGCC
GTCCCGGTGT CCCGCCCGGC GGGCTCGGAC GGCGCGCTCG TCGCGATCGA CGCCACCTCC
GGCGCGGGCG GCCTGCCCGT CAAGGCCGAG GACTTCGACG TCTACTACTT CGCGCCGCAG
AAGTGCTTCG CCTCGGACGG CGGCCTGTGG CTGTCCCTGA TGTCCCCGGC CGCGCTCGAC
CGCGTCCGCG AGATCGGCGC CTCCGGCCGC TGGGTCCCCG AGTTCCTGTC GCTCACCACG
GCGCTGGACA ACTCCACCAA GGACCAGACC TACAACACCC CGTCCGTGGC GACGCTGTTC
CTGCTCAACG AGCAGCTGAA GTGGCTGAAC GGCAACGGCG GCCTCGACTG GGCGGTCTCC
CGGACCGCCG ACTCGTCGTC GCGGCTGTAC TCCTGGGCCG AGCAGACCTC GTACACCTCG
CCGTACGTGG CCGACCCGGC GCACCGCTCG CAGGTCGTCG GCACCGTCGA CTTCGCCGAC
GAGGTCGACG CCTCGGTCGT GGCGAAGGTG CTGCGCGCCA ACGGGATCGT GGACGTGGAG
CCGTACCGCA AGCTCGGCCG CAACCAGCTG CGCGTGGCCA TGTTCCCGGC CGTCGAGCCG
GAGGACGTCT CCACCCTCAC CGAGGCGGTC GACTGGGTGG TCGGCCAGCT CTGA
|
|---|
| Protein sequence | MTQTADPTSL VLPADLKPSD GRFGCGPSKV RPEALRALAA EGADLMGTSH RQKPVKSLVG
EVRSGLRALF SLPEGYEVVL GNGGTTAFWD AAAFGLVRER SQHFTYGEFS SKFAKVTKDA
PFLGEPVVVK SEPGTAPEIT FAEGVDLVGW AHNETSTGVA VPVSRPAGSD GALVAIDATS
GAGGLPVKAE DFDVYYFAPQ KCFASDGGLW LSLMSPAALD RVREIGASGR WVPEFLSLTT
ALDNSTKDQT YNTPSVATLF LLNEQLKWLN GNGGLDWAVS RTADSSSRLY SWAEQTSYTS
PYVADPAHRS QVVGTVDFAD EVDASVVAKV LRANGIVDVE PYRKLGRNQL RVAMFPAVEP
EDVSTLTEAV DWVVGQL
|
|---|
| |