Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0490 |
Symbol | |
ID | 8324649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 528446 |
End bp | 529831 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644941034 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003098303 |
Protein GI | 256374643 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTGCTT ATGCGGAGGG CTCGCAGACC GATCGACCCG ATCGAGACAC CGCGCTACCT CCGCCCAAGC GCAAGCGACC AGGCACGTTC AGCTCCCTGA AGGTCCGCAA CTACCGGCTC TACGCCTCCG GCCAGGTCGT CTCGCTGGTC GGCCTCTGGA TGCAGCGCGT CGCCCAGGAC TGGCTGGTCC TGGAGCTGTC CGGCGGCGAC CCGGTCGCGC TCGGCCTCGC CGCCGCCCTC CAGTTCGCCC CCACCCTGCT GCTGTCGCTG TGGGCGGGCG TGCTCGCCGA CCGGCTCGAC AAGCGCCGCC TGCTGCTCGT GCTGGAGACC GGCCTCGGCC TGTGCGCGCT CGCGCTCGGC CTGCTGGAGG TCCTCGGCGC CGCCGAGCTG TGGCACGTCT ACCTGCTGTG CCTGCTGCTC GGCGCGGTGT CCGCCGTGGA GACGCCGGTG CGCCAGTCGT TCGTGGTGGA GATGGTCGGC CGCGACCAGC TCACCAACGC GGTCGCGCTC AACTCCATGA CGTTCAACCT GGCCCGCATG GTCGGACCGG CCGTCGCGGG CGGCCTGATC GTGGTCGTCG GCGGCACCGG CTGGGTGTTC CTGATCAACG CCGCCAGCTT CGTCGCGGTG ATCGCGGGCC TGCTGCTGAT GCGCCCCGCC GAGCTGCACC GGGGCGAGCC GGTGCCCAGG GAGCCCGGCC AGCTCCGCGA GGGCCTGCGC TACGTGCGCA AGCGCCCGGA CCTGGTGATC CTGCTGTTCC TGGTGTTCTT CGTGAGCACG TTCGGGTTGA ACTTCTACGT CACCCTCGCC GTGCTGGCCC GCAACACCTT CGGCGGCGAC GCCGACGCGT ACGGGCTGCT GTCCACGCTG CTCGCGGTCG GCACCCTCGC GGGCGCGACG CTGGCCGCCC GGCGCAGCAC GCGCGGCGCG AAGCCGCGGC CGGTGCTGCT GGTCGTCGGC GCGCTGGCGT TCGGCGTGCT GGAGATCGTC GCCGGGCTGA TGCCCACGCT GTGGCTGGTC GGGCTGGTGC TGATCCCGGT CGGCGTGGCG ATGATGACCT TCACGACCAC CGCCAACGCG ACCGTGCAGC TGTCCGTCAC GCCCGCCATG CGCGGCCGGG TGATGGGGCT CTACATGCTG GTCTTCCTGG GCGGCAACCC GGTCGGCGGG CCCGTCATGG GCTGGCTGGC CGACCACTTC ACCGCCCGCG CGCCGCTGGT GGTCGGCGGC GCGGTCTCGA TCGTGGCCGC GCTGGTCGGC GCGCTCGTGC TCGCCCGCCG GGGCGGGATG CCGCTGCCCG TGGTGCGGCT GTCCCGGCGC AGGGCCGGGC CGGACCAGGC CGTGCCCGCC GCCGCCACGC CCGCCGCCGC CACCCCCGAC GCGTGA
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Protein sequence | MPAYAEGSQT DRPDRDTALP PPKRKRPGTF SSLKVRNYRL YASGQVVSLV GLWMQRVAQD WLVLELSGGD PVALGLAAAL QFAPTLLLSL WAGVLADRLD KRRLLLVLET GLGLCALALG LLEVLGAAEL WHVYLLCLLL GAVSAVETPV RQSFVVEMVG RDQLTNAVAL NSMTFNLARM VGPAVAGGLI VVVGGTGWVF LINAASFVAV IAGLLLMRPA ELHRGEPVPR EPGQLREGLR YVRKRPDLVI LLFLVFFVST FGLNFYVTLA VLARNTFGGD ADAYGLLSTL LAVGTLAGAT LAARRSTRGA KPRPVLLVVG ALAFGVLEIV AGLMPTLWLV GLVLIPVGVA MMTFTTTANA TVQLSVTPAM RGRVMGLYML VFLGGNPVGG PVMGWLADHF TARAPLVVGG AVSIVAALVG ALVLARRGGM PLPVVRLSRR RAGPDQAVPA AATPAAATPD A
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