| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0490 |
|---|
| Symbol | |
|---|
| ID | 8324649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 528446 |
|---|
| End bp | 529831 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644941034 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003098303 |
|---|
| Protein GI | 256374643 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCTGCTT ATGCGGAGGG CTCGCAGACC GATCGACCCG ATCGAGACAC CGCGCTACCT
CCGCCCAAGC GCAAGCGACC AGGCACGTTC AGCTCCCTGA AGGTCCGCAA CTACCGGCTC
TACGCCTCCG GCCAGGTCGT CTCGCTGGTC GGCCTCTGGA TGCAGCGCGT CGCCCAGGAC
TGGCTGGTCC TGGAGCTGTC CGGCGGCGAC CCGGTCGCGC TCGGCCTCGC CGCCGCCCTC
CAGTTCGCCC CCACCCTGCT GCTGTCGCTG TGGGCGGGCG TGCTCGCCGA CCGGCTCGAC
AAGCGCCGCC TGCTGCTCGT GCTGGAGACC GGCCTCGGCC TGTGCGCGCT CGCGCTCGGC
CTGCTGGAGG TCCTCGGCGC CGCCGAGCTG TGGCACGTCT ACCTGCTGTG CCTGCTGCTC
GGCGCGGTGT CCGCCGTGGA GACGCCGGTG CGCCAGTCGT TCGTGGTGGA GATGGTCGGC
CGCGACCAGC TCACCAACGC GGTCGCGCTC AACTCCATGA CGTTCAACCT GGCCCGCATG
GTCGGACCGG CCGTCGCGGG CGGCCTGATC GTGGTCGTCG GCGGCACCGG CTGGGTGTTC
CTGATCAACG CCGCCAGCTT CGTCGCGGTG ATCGCGGGCC TGCTGCTGAT GCGCCCCGCC
GAGCTGCACC GGGGCGAGCC GGTGCCCAGG GAGCCCGGCC AGCTCCGCGA GGGCCTGCGC
TACGTGCGCA AGCGCCCGGA CCTGGTGATC CTGCTGTTCC TGGTGTTCTT CGTGAGCACG
TTCGGGTTGA ACTTCTACGT CACCCTCGCC GTGCTGGCCC GCAACACCTT CGGCGGCGAC
GCCGACGCGT ACGGGCTGCT GTCCACGCTG CTCGCGGTCG GCACCCTCGC GGGCGCGACG
CTGGCCGCCC GGCGCAGCAC GCGCGGCGCG AAGCCGCGGC CGGTGCTGCT GGTCGTCGGC
GCGCTGGCGT TCGGCGTGCT GGAGATCGTC GCCGGGCTGA TGCCCACGCT GTGGCTGGTC
GGGCTGGTGC TGATCCCGGT CGGCGTGGCG ATGATGACCT TCACGACCAC CGCCAACGCG
ACCGTGCAGC TGTCCGTCAC GCCCGCCATG CGCGGCCGGG TGATGGGGCT CTACATGCTG
GTCTTCCTGG GCGGCAACCC GGTCGGCGGG CCCGTCATGG GCTGGCTGGC CGACCACTTC
ACCGCCCGCG CGCCGCTGGT GGTCGGCGGC GCGGTCTCGA TCGTGGCCGC GCTGGTCGGC
GCGCTCGTGC TCGCCCGCCG GGGCGGGATG CCGCTGCCCG TGGTGCGGCT GTCCCGGCGC
AGGGCCGGGC CGGACCAGGC CGTGCCCGCC GCCGCCACGC CCGCCGCCGC CACCCCCGAC
GCGTGA
|
|---|
| Protein sequence | MPAYAEGSQT DRPDRDTALP PPKRKRPGTF SSLKVRNYRL YASGQVVSLV GLWMQRVAQD
WLVLELSGGD PVALGLAAAL QFAPTLLLSL WAGVLADRLD KRRLLLVLET GLGLCALALG
LLEVLGAAEL WHVYLLCLLL GAVSAVETPV RQSFVVEMVG RDQLTNAVAL NSMTFNLARM
VGPAVAGGLI VVVGGTGWVF LINAASFVAV IAGLLLMRPA ELHRGEPVPR EPGQLREGLR
YVRKRPDLVI LLFLVFFVST FGLNFYVTLA VLARNTFGGD ADAYGLLSTL LAVGTLAGAT
LAARRSTRGA KPRPVLLVVG ALAFGVLEIV AGLMPTLWLV GLVLIPVGVA MMTFTTTANA
TVQLSVTPAM RGRVMGLYML VFLGGNPVGG PVMGWLADHF TARAPLVVGG AVSIVAALVG
ALVLARRGGM PLPVVRLSRR RAGPDQAVPA AATPAAATPD A
|
|---|
| |