Gene Amir_0469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0469 
Symbol 
ID8324628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp509101 
End bp509775 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content71% 
IMG OID644941013 
ProductTransglycosylase domain protein 
Protein accessionYP_003098282 
Protein GI256374622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGTTT ACCGAGGCAA GCACCGTTTC CAGTCCCTCC GCGCCAACGC GGCCGTTCGC 
GGCATCGCGA AGGTGGCGGT GGCGGGCGTC ATCGTCGGCG CCCCGCTGGC CATGGCGGGC 
ACGGCGTCCG CCCAGGGCTC CGGCGTGAAC TGGGACGCCG TCGCGGCGTG CGAGAGCGGC 
GGCAACTGGA GCATCAACAC CGGCAACGGG TACTACGGCG GCCTGCAGTT CAGCCCGTCG 
ACCTGGAGCA GCCACGGCGG TTCCGGGATG GCCAACCAGG CATCCAGGGC CGAGCAGATC 
CGCGTGGCCG AGAACGTCAT GAAGACCCAG GGCATCGGCG CCTGGCCCGT CTGCGGCCCC 
AAGGGCCTCG GCGGCGGCGC GGCCCCGGCA CGCACCGCGC CAGCGCCCCA GCAGGCGGCG 
CCCGCGCCCC AGAAGCAGTC GACGCCGCAG AAGCGCGCGA CGGCCCCGGT CCAGCAGCAG 
GCGGCCCCCG TGGTCGTGGC GCTGCCCCAG AGCAACCCGA ACGGCGACTA CGAGATCAAG 
GCGGGGGACA CCCTGTCGAA GATCGCCTCG GAGCTGAAGG TCGAGGGCGG GTGGGCCAAG 
CTGCACGAGC TGAACAAGCA GTACATCCCG AACGCCGACC TGATCATGTC CGGCATGAAG 
ATCGCCACCA AGTGA
 
Protein sequence
MAVYRGKHRF QSLRANAAVR GIAKVAVAGV IVGAPLAMAG TASAQGSGVN WDAVAACESG 
GNWSINTGNG YYGGLQFSPS TWSSHGGSGM ANQASRAEQI RVAENVMKTQ GIGAWPVCGP 
KGLGGGAAPA RTAPAPQQAA PAPQKQSTPQ KRATAPVQQQ AAPVVVALPQ SNPNGDYEIK 
AGDTLSKIAS ELKVEGGWAK LHELNKQYIP NADLIMSGMK IATK