Gene Amir_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0430 
Symbol 
ID8324589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp464055 
End bp464762 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content76% 
IMG OID644940974 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003098243 
Protein GI256374583 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0615592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCC AGGGCACCGT GTCACCCGCC CGCCGCAGGG GTCTGGCCGA CGAGGTGGCC 
GACCGCATCC GCGAGGGCAT CCTCACCGGC GCCTACGAAC CCGGCAGGCA GCTGCGCGAG 
GTCGAGCTGT CGACCGTCAT GGACGTCAGC CGGGGCCCCG TCCGCGAGGC GCTGCGACTG 
CTGGAGCACG AGGGGCTCGT GCACGTCACC TGGCACCGGG GCGCGACGGT CACCCGCTTC 
TCCCGCCGGG ACGTCGCCGA GCTGGACAGC CTGCGCGGGG CCCTGGAGTG CCTGGCCGTG 
CACGAGGTCG CGCACCGGGC CACCGAGGAG GACTTCGCCG CGCTCGACCG GGCCGCCGAG 
GCGCTGGCGC GGGCCGTCGG GGCGCACGAG CTGGCGCAGC GGGACGTCGA CTTCCACGAC 
GCGGTGTTCG CCGCCGCGCA CCACGACCGG CTGACCCGCT CGTGGGGGTG CATCCGGCGG 
CAGGTCCACC TGTTCCTGCT CACCCGGATC AGCCGGGACG AGGGGCTGCG CGGCGGGTGC 
GCCGAGGAGC ACCGGGAGCT GGTCGCCGCG CTGCGCACCC GTGACGCGGC CACCGCGAGC 
GCGCTGCTCG GCGAGCACCG CAGGCGGGTG TTCGAGCTGT CGGACGACGA CGACTGGTCC 
GACCTGCTGT GCCCGGACGA CTGCGGGGGC GAGCGGCGCG AGGGGTGA
 
Protein sequence
MSTQGTVSPA RRRGLADEVA DRIREGILTG AYEPGRQLRE VELSTVMDVS RGPVREALRL 
LEHEGLVHVT WHRGATVTRF SRRDVAELDS LRGALECLAV HEVAHRATEE DFAALDRAAE 
ALARAVGAHE LAQRDVDFHD AVFAAAHHDR LTRSWGCIRR QVHLFLLTRI SRDEGLRGGC 
AEEHRELVAA LRTRDAATAS ALLGEHRRRV FELSDDDDWS DLLCPDDCGG ERREG