Gene Amir_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0423 
Symbol 
ID8324582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp458084 
End bp458638 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content76% 
IMG OID644940967 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003098236 
Protein GI256374576 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.567311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGCGG ACGCCAGGAA GAACCGCGAC CACCTGCTCG CGATCGCGGA CGCGGTCATC 
ACCGAGCAGG GCGCGGACGT GTCGATGCGC GACCTCGCGC GCCGCGCCGA GGTCGGCCTC 
GCGACCCTGC TGCGCCACTT CCCGACCAGG GACGCGCTGC TGGACGCCCT GCTCCGCGCG 
GGCTTCGACG AGCTGACCAC CCTCGCGGAC CGGCTGGAGG CGCGCCTGCC CCCCGGCGAG 
GCGCTCAAGG CGTGGCTGCG CGAGTTCGTC GCCTGCGCGC ACACCTACCG GGGCGCCGTC 
ACGACCATGA TGGGCGCCAT CGAGGACCCG GACTCCGCGC TGCACGCCTC CTGCGTCGCG 
ATGCGCGGCT CCGGCGCCCG GCTGCTGGAG CGCGCCCAGG CCGCGGGCCA GGCCAGGACC 
GACCTGACCG GCCCCGACCT GTTCGCGCTC GGCGGGGCCC TCATCTGGCT GCACGACCAG 
CCCACGTCCG CGCCCCGCGC CGACCACCTG CTCGACGTGG TCGCCGCCGC GATCCTGACC 
CCGGAGAAGC CGTGA
 
Protein sequence
MRADARKNRD HLLAIADAVI TEQGADVSMR DLARRAEVGL ATLLRHFPTR DALLDALLRA 
GFDELTTLAD RLEARLPPGE ALKAWLREFV ACAHTYRGAV TTMMGAIEDP DSALHASCVA 
MRGSGARLLE RAQAAGQART DLTGPDLFAL GGALIWLHDQ PTSAPRADHL LDVVAAAILT 
PEKP