Gene Amir_0421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0421 
Symbol 
ID8324580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp456177 
End bp456746 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content77% 
IMG OID644940965 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003098234 
Protein GI256374574 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0114693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACTG CCCCGGTCCG GGACGAGCAC CCCAGGGAGA GGCTGCTCCG CACCGCGGCC 
CGCCTCTTCT ACGCCGAGGG CGTCCACGCG GTCGGGGTGG ACCGCCTGGT CAAGCAGGCC 
TCGGTCACCA GGGCGACGTT CTACCGGCAC TTCCCGGCCA AGGACGACCT GGTCGCCGCG 
TACCTGGCCG AGGAGAGCCT GCGCATCCGC GAGGGCATGG CCGCGCTCAC CGACGGCCGC 
CCGCCGCGCG CCGCGCTCGT GGCGATGCTC GCCGAGGTCG GCGACGCGAC CTGCGCGGAC 
GGCTTCCGGG GCTGCCAGTT CCTGAACGCC GCCGCCGAGC ACCCCGACCC GGCCCACCCG 
GTCCGCGCGG TCGTGGACGA CCACCGCCGC TGGTTCGCCG GACGCCTCCG CGACCTGGCC 
GCCGAAGCCG GTTGCCAGGA CCCGGACCAC GTGGCCCGCG TCCTGGTCCT GCTGCGCGAC 
GGCGCCCTGT CCGGCGGCGA CCTGGACGAC CCGGCGCTCG TGCGCGCCAC CCTCCGCCGG 
GCCGTCGAGG CGGTCGTGCC CGAGCGGTAG
 
Protein sequence
MTTAPVRDEH PRERLLRTAA RLFYAEGVHA VGVDRLVKQA SVTRATFYRH FPAKDDLVAA 
YLAEESLRIR EGMAALTDGR PPRAALVAML AEVGDATCAD GFRGCQFLNA AAEHPDPAHP 
VRAVVDDHRR WFAGRLRDLA AEAGCQDPDH VARVLVLLRD GALSGGDLDD PALVRATLRR 
AVEAVVPER