Gene Amir_0409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0409 
Symbol 
ID8324568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp449507 
End bp449704 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content78% 
IMG OID644940953 
Productthiamine biosynthesis protein ThiS 
Protein accessionYP_003098222 
Protein GI256374562 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0838013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGGCCC GGCTCAACGG CGTCCTGCGC GACCTCCCCG ACGGCGCCAC CGTCGCCGAC 
GCCGTCACCG CCCTCGGCGC ACCCACCACC GGCGTCGCGG TGGCCGTGGA CGGCGAGGTC
GTCCCGCGTG CCGCCTGGGA CCGGCCGCTG CGCGAGCACG CCCGCGTCGA GGTCATCACC
GCCGTGCAGG GAGGCTGA
 
Protein sequence
MRARLNGVLR DLPDGATVAD AVTALGAPTT GVAVAVDGEV VPRAAWDRPL REHARVEVIT 
AVQGG