| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0405 |
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| Symbol | |
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| ID | 8324564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 444671 |
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| End bp | 445618 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644940949 |
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| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
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| Protein accession | YP_003098218 |
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| Protein GI | 256374558 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0956264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACCTCG TGACGCTGGA AGACATCCGG GCCGCCGCCG AGCGGATCTC CGGGGCGGTG
CTGCGCACGC CGCTGCTGCC GTGGGGCGAC GGCCTCTGGC TCAAGCCGGA GAGCCTGCAA
CCGGTGGGCG CGTTCAAGAT CAGGGGCGCC TACAACGCGC TCGCCCGCCT CACGCCCGAG
GACCGGGCGC GCGGGGTGGT GGCCTACTCC AGCGGGAACC ACTCGCAGGC CGTCGCGCGC
GCGGCGCGGG AGTTCGGCGT GCCCGCCGTG ATCGTGATCC CGGACAACGC GCCCGAGGTC
AAGGTCGAGG CGACGCGCGC GCTCGGGGCC GAGGTGGTCC GGGTGCCGAT GGCCGAGCGG
GAGAGCCGGG CGCTGGAGCT GGCCGCCGAG CGCGGCGCGG TGCTGGTGCC GCCGTTCGAC
CACCCGGACG TGATCGCCGG GCAGGGCACG ATCGGGCTGG AGATCGTGGC CGACCTGCCG
GAGGTCGCGA CCGTGCTCGT GCCGGTCAGC GGCGGCGGCC TGCTGTCCGG CGTGGCGGTG
GCGGTGAAGG CGCTGCGGCC GGACGCGCGG GTGATCGGCG TGGAGCCGGA GCTGGCCGCC
GACGCGGGCG AGTCCTTCGC GGCCGGACGT CGGGTGGACT GGCCCGCCGA GGACCGGGCC
AGGACCATCG CGGACGGGCT GCGGGCCCAG CCGTCGGAGC GGACGTTCGC GCACATCCGG
GCGCACGTGG ACGGGTTCGC GGCGGTCTCC GAGGCCCGGA TCAGGGCGGC GGTGCGGGAG
CTGGCGGTGC GGGCGCGGCT GGTGGTGGAG CCCAGCGGGG CGACGACCCT GGCGGCGTTC
CTGGAGCTGC GCGAGCGCGG CGAGCTGGGC GACGGGCCGG TCGTGGCGGT GCTGTCGGGC
GGCAACGTGG ACCCGGCGCT GCTCGCCGAG GTGCTGCGGG AGGCGTGA
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| Protein sequence | MDLVTLEDIR AAAERISGAV LRTPLLPWGD GLWLKPESLQ PVGAFKIRGA YNALARLTPE
DRARGVVAYS SGNHSQAVAR AAREFGVPAV IVIPDNAPEV KVEATRALGA EVVRVPMAER
ESRALELAAE RGAVLVPPFD HPDVIAGQGT IGLEIVADLP EVATVLVPVS GGGLLSGVAV
AVKALRPDAR VIGVEPELAA DAGESFAAGR RVDWPAEDRA RTIADGLRAQ PSERTFAHIR
AHVDGFAAVS EARIRAAVRE LAVRARLVVE PSGATTLAAF LELRERGELG DGPVVAVLSG
GNVDPALLAE VLREA
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