Gene Amir_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0404 
Symbol 
ID8324563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp443873 
End bp444622 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content73% 
IMG OID644940948 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003098217 
Protein GI256374557 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.116954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGAGA CGAGCCTGGA GTCCAGGTCG CGTGCACAGC GGGAACCGAA GTACTGGGGC 
CTCAAACGCC ACCTGCTCGA CCTGCTGCGC GCCATGCCGC CGGGTTCGCC GATCCCCACC
GAGCGCTCGC TCGCCTCGGA GTTCGACGTG TCCCGCACGA CGGTGCGCCA GGCGCTGGCC
GAGCTGACCG TCGAGGGCAG GCTGCTGCGG GTGCAGGGCA AGGGCACGTT CGCCGCGGAA
CCCAAGGTGG CGCAACGGCT CCAGCTCTCC TCGTACACGC AGGACATGCT GGCGCAGGGC
CGCCAGCCGT CGTCCCGGCT GATCGACGCC TCCGAGCAGC CCGCCGAGGC CGAGCTGGCC
CGGCTGCTGG GCGTGCGGGC GGGGGCGAAG GTGCTGCGGC TGCACCGGCT GAGGCTGGCC
GACGGCGAGC CGATGGCGAT CGAGACCACG CACCTGGCGC TCGGCCGGTT CCGGGGGCTG
CGGCGGTACC TGTCGCCCGG CGGGTCGCTG TACCAGGTGC TGCGCGAGCG GTTCGGCACC
GAGATGGGGC ACGCCGAGGA GACCATCGAG ACCGCGCTCG CCTCGCCCGA GGAGGCGGAG
CTGCTGGGCG CGGACATCGG ACTGCCCATG CTGCTGCTCT CCCGCCACTC CTACGACACC
GAGGGCAACC CGGTGGAGTG GGTGCGCTCG GTGTACCGGG GCGACCGCTA CAAGTTCGTC
GCGACCCTGA ACCGCCCGGT CGAGGGCTGA
 
Protein sequence
MLETSLESRS RAQREPKYWG LKRHLLDLLR AMPPGSPIPT ERSLASEFDV SRTTVRQALA 
ELTVEGRLLR VQGKGTFAAE PKVAQRLQLS SYTQDMLAQG RQPSSRLIDA SEQPAEAELA
RLLGVRAGAK VLRLHRLRLA DGEPMAIETT HLALGRFRGL RRYLSPGGSL YQVLRERFGT
EMGHAEETIE TALASPEEAE LLGADIGLPM LLLSRHSYDT EGNPVEWVRS VYRGDRYKFV
ATLNRPVEG