Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0404 |
Symbol | |
ID | 8324563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 443873 |
End bp | 444622 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644940948 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003098217 |
Protein GI | 256374557 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.116954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGAGA CGAGCCTGGA GTCCAGGTCG CGTGCACAGC GGGAACCGAA GTACTGGGGC CTCAAACGCC ACCTGCTCGA CCTGCTGCGC GCCATGCCGC CGGGTTCGCC GATCCCCACC GAGCGCTCGC TCGCCTCGGA GTTCGACGTG TCCCGCACGA CGGTGCGCCA GGCGCTGGCC GAGCTGACCG TCGAGGGCAG GCTGCTGCGG GTGCAGGGCA AGGGCACGTT CGCCGCGGAA CCCAAGGTGG CGCAACGGCT CCAGCTCTCC TCGTACACGC AGGACATGCT GGCGCAGGGC CGCCAGCCGT CGTCCCGGCT GATCGACGCC TCCGAGCAGC CCGCCGAGGC CGAGCTGGCC CGGCTGCTGG GCGTGCGGGC GGGGGCGAAG GTGCTGCGGC TGCACCGGCT GAGGCTGGCC GACGGCGAGC CGATGGCGAT CGAGACCACG CACCTGGCGC TCGGCCGGTT CCGGGGGCTG CGGCGGTACC TGTCGCCCGG CGGGTCGCTG TACCAGGTGC TGCGCGAGCG GTTCGGCACC GAGATGGGGC ACGCCGAGGA GACCATCGAG ACCGCGCTCG CCTCGCCCGA GGAGGCGGAG CTGCTGGGCG CGGACATCGG ACTGCCCATG CTGCTGCTCT CCCGCCACTC CTACGACACC GAGGGCAACC CGGTGGAGTG GGTGCGCTCG GTGTACCGGG GCGACCGCTA CAAGTTCGTC GCGACCCTGA ACCGCCCGGT CGAGGGCTGA
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Protein sequence | MLETSLESRS RAQREPKYWG LKRHLLDLLR AMPPGSPIPT ERSLASEFDV SRTTVRQALA ELTVEGRLLR VQGKGTFAAE PKVAQRLQLS SYTQDMLAQG RQPSSRLIDA SEQPAEAELA RLLGVRAGAK VLRLHRLRLA DGEPMAIETT HLALGRFRGL RRYLSPGGSL YQVLRERFGT EMGHAEETIE TALASPEEAE LLGADIGLPM LLLSRHSYDT EGNPVEWVRS VYRGDRYKFV ATLNRPVEG
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