Gene Amir_0399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0399 
Symbol 
ID8324558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp438344 
End bp439018 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content75% 
IMG OID644940943 
ProductGntR domain protein 
Protein accessionYP_003098212 
Protein GI256374552 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGTTA CCGACGACGC GATCCTGCGC GTTCGGGAGA TGATCGTCTC CGGGGAGCTC 
AAGCCCGGTG ACCGGTTGCC CCGCGAGGCC GTGCTCGCCG AGCGGTTGGG GTTGTCGCGG 
AACTCGTTGC GCGAGGCGGT CAAGGCGCTG TCGCTGGTGC GGGTGCTGGA CGTGCGGCAG 
GGGGACGGGA CCTACGTGTC GAGCCTGCGG GCCGACGAGC TGCTCGGGGC CCTGTCGTTC 
GTGCTCGACC TGCACCGGGG CGAGGAGTCG CTGCTGGAGG TCGTGCAGGT CCGGCGCATC 
CTGGAACCGG CGGCGTGCGC GCTCGCGGCC CAGCGGGTGA CCGCCGAGGA CGCCGCCGCG 
CTGCGGGCGC TGTGCGACGC GGCCGAGGCA GCCGAGACGG TGGAGGAGCT GGTCGAGCAC 
GACCTGGCGT TCCACCGGGC CGTCGCCGCG CACTCCGGGA ACGCCTACCT GGCGCAGCTG 
CTGGACACGC TCGCCGGGCC GACGGTGCGG GCCCGGATCT GGCGGGGCAT CGCCCAGGCC 
GGGGCCAAGT CGCGGACCGT GGCCGAGCAC CGGGCGATCG TGGACGCGCT CGCCGCCGGG 
CAGCCGGAGG TGGCGCGGTC GTGGAGCACG GTGCACATCG CCGGGGTCGA GCAGTGGCTG 
CTGGTGCTGG CCTGA
 
Protein sequence
MAVTDDAILR VREMIVSGEL KPGDRLPREA VLAERLGLSR NSLREAVKAL SLVRVLDVRQ 
GDGTYVSSLR ADELLGALSF VLDLHRGEES LLEVVQVRRI LEPAACALAA QRVTAEDAAA 
LRALCDAAEA AETVEELVEH DLAFHRAVAA HSGNAYLAQL LDTLAGPTVR ARIWRGIAQA 
GAKSRTVAEH RAIVDALAAG QPEVARSWST VHIAGVEQWL LVLA