| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0371 |
|---|
| Symbol | |
|---|
| ID | 8324529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 403246 |
|---|
| End bp | 404682 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644940915 |
|---|
| Product | Alpha,alpha-trehalose-phosphate synthase (UDP- forming) |
|---|
| Protein accession | YP_003098185 |
|---|
| Protein GI | 256374525 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0380] Trehalose-6-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.49231 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAGCA TTGGCGAGAA CGGCGCGGAT TTCCTGGTCG TGGCCAACCG CCTGCCGGTC
GACCTGGAGC GGCTGCCCGA CGGCACGCAG CGGTGGAAGC ACAGCCCCGG CGGGCTGGTG
AGCGCGCTGG AGCCGTTCCT GCGGGTGCAC AGCGGCGCGT GGGTCGGCTG GCCCGGAGTG
GCCGACGCGG ACGTGGAGGC GTTCGAGGAG GACGGCCTCC AGCTCCACCC GGTGTCGCTC
AGCTCCGCCG AGGTCACCGA CTACTACGAG GGGTTCTCCA ACGGCACGCT GTGGCCGCTG
TACCACGACG TGGTCGAGCG GCCCGCGTTC CACCGGCGCT GGTGGAACAC CTACGTGCGG
GTGAACCAGA GGTTCGCGGA CGTGACGGCG AAGGTCGCCG CGCACGGCGC GACGGTGTGG
GTGCAGGACT ACCAGCTGCA GCTGGTGCCC GCGATGCTGC GGGAGCTGCG GCCGGACCTG
CGGATCGGCT TCTTCCTGCA CATCCCGTTC CCCCCGGTCG AGCTGTTCAT GCAGCTGCCG
TGGCGAACCG AGATCATCCG CGGCCTGCTC GGCGCGGACC TGGTCGGGTT CCACCGGCCG
GGCGGCGCGC AGAACTTCCT GTGGCTGGCC CGCAGGCTGG TCGGCCTGGA GCCGAGCCGG
GGCGCGGTCG GCGTGCGCAC GCGGCCCGGT GTCGTGCAGG TGGGCGACCG CACGGTGCGG
GTGGGCGCGT TCCCGATCTC GATCGACTCC TCGGCGCTGG ACGCGCTGGC CCGCTCCAAG
GAGGTCCAGG CGCGGGCCAG GCAGATCCGG GAGGACCTGG GCAATCCGAA GAAGGTGCTG
CTCGGCGTCG ACCGGCTCGA CTACACCAAG GGCATCGACG TCCGGCTCCG GGCGCTCAAC
GAGCTGCTGG AGGACGGCAG GGTCGCGCCC GAGGACGTGG TGATGGTCCA GCTGGCCACG
CCCAGCCGGG AGCGGGTCGA GCACTACAAG CAGATGCGCG GCGACATCGA GCGCATGGTG
GGCAGGCTCA ACGGCGAGTT CTCCCGCGTC GGCAGGCCGG TGCTGCACTA CCTGCACCAG
TCGGTCGACC GCAAGGAGCT GACGGCGTTC ATGCTCGCCG CCGACGTCAT GGTGGTGACG
CCGGTGCGCG ACGGGATGAA CCTCGTCTGC AAGGAGTACG TGGCGAGCAG GCACGACCTC
GGCGGGGCGC TCGTGCTGAG CGAGTTCGCG GGGGCCGCGG CGGAGCTGAC CTCGGCTTTC
CTGGTCAACC CGCACGACCT CGACGGGGTG AAGAAAGCGC TTGAGGACGC CCTCGCTCTC
GATCCCGCCG AGGGTCGCCG TAGGATGCGC GCTCTGCGCC GCCAAGTCCT CACACACGAC
GTCGACCGCT GGGCTCGCTC GTTCCTTGAA GCCTTGGGCG CGCAAACAGC CGTCTGA
|
|---|
| Protein sequence | MSSIGENGAD FLVVANRLPV DLERLPDGTQ RWKHSPGGLV SALEPFLRVH SGAWVGWPGV
ADADVEAFEE DGLQLHPVSL SSAEVTDYYE GFSNGTLWPL YHDVVERPAF HRRWWNTYVR
VNQRFADVTA KVAAHGATVW VQDYQLQLVP AMLRELRPDL RIGFFLHIPF PPVELFMQLP
WRTEIIRGLL GADLVGFHRP GGAQNFLWLA RRLVGLEPSR GAVGVRTRPG VVQVGDRTVR
VGAFPISIDS SALDALARSK EVQARARQIR EDLGNPKKVL LGVDRLDYTK GIDVRLRALN
ELLEDGRVAP EDVVMVQLAT PSRERVEHYK QMRGDIERMV GRLNGEFSRV GRPVLHYLHQ
SVDRKELTAF MLAADVMVVT PVRDGMNLVC KEYVASRHDL GGALVLSEFA GAAAELTSAF
LVNPHDLDGV KKALEDALAL DPAEGRRRMR ALRRQVLTHD VDRWARSFLE ALGAQTAV
|
|---|
| |