| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0368 |
|---|
| Symbol | |
|---|
| ID | 8324526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 399383 |
|---|
| End bp | 400234 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644940913 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003098183 |
|---|
| Protein GI | 256374523 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.451559 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC CCACCACCTG GTTCGTCACC GGCGCGTCGA AGGGCCTCGG CCTCGAACTC
GTCCGCCAGC TCCTCGCGCA GGGCGCCAAC GTCGCCGCCA CCTCCCGCTC CGCCGACCGC
CTCCGCGCCG CCCTCGCCGA CGCCGACGCC GACACCACCC GCCTGCTGCC GCTCGCCGTC
GACCTCGCCG ACGAGGCCGA CGTCCAGCGC GCCGTCACCG CCGCCGCCGA GCGCTTCGGC
AGGCTGGACG TGGTGGTCAA CAACGCGGGC TACGGCTACC TGGCCGCCGT GGAGGAGACC
ACCGCCCAGG CCGTCCGGGA CATGCTGGAC GTGCAGGTCG TCGGCGTGTG GAACGTGCTG
CGCGCCGCGC TCCCGGTCAT GCGGGAGCAG CGCTCCGGCC GGGTCGTCAA CGTCTCCTCG
GTCCTCGGCC TGGTCTCGCT GCCCGGCTGG GCCCTGTACT GCGCGGGCAA GTTCGCGCTG
GAGGCCATGA CCGAGGCGCT GGCCGGCGAG GTGGCCGGGC ACGGCATCGA GGTCACCCTC
GTGGAACCCG GCTACTTCCG CACCTCGTTC CTCAGCCCGG ACTCCCTGGC GCTGCCCGAG
ACCACCACCG ACCACTACCC GCAGATCCGG CGGATGGTCG CCGACCACCG CGCCCTGCAG
GGCTCCCAGC TCGGCGACCC GGCGCGCGGC GCGGCCGAGA TCATCGCGCG GGCCTCGGTC
GCGGGCGCCC CGCTGCGCCA GGTCCTCGGC TCCGACTCGC ACGCCTACGC CACCGCCAAG
GTCGACGCCC TGCGCGCGAA CCTCGCCGCC GAGGCGGACA GCGCCCCCAG GACCGACCAC
CCCGCAGCCT GA
|
|---|
| Protein sequence | MTTPTTWFVT GASKGLGLEL VRQLLAQGAN VAATSRSADR LRAALADADA DTTRLLPLAV
DLADEADVQR AVTAAAERFG RLDVVVNNAG YGYLAAVEET TAQAVRDMLD VQVVGVWNVL
RAALPVMREQ RSGRVVNVSS VLGLVSLPGW ALYCAGKFAL EAMTEALAGE VAGHGIEVTL
VEPGYFRTSF LSPDSLALPE TTTDHYPQIR RMVADHRALQ GSQLGDPARG AAEIIARASV
AGAPLRQVLG SDSHAYATAK VDALRANLAA EADSAPRTDH PAA
|
|---|
| |