Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0352 |
Symbol | |
ID | 8324510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 382167 |
End bp | 383057 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644940897 |
Product | periplasmic solute binding protein |
Protein accession | YP_003098167 |
Protein GI | 256374507 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGTGC GCACCACGCT GATCACCGCC GTGGCGGTGC TCGGTCTCAC CACCGCCTGC GGCAGCGCCG ACCAGGGCGG AAGCGGCTCC TCCGACGCCC CCGCCGGCGC GGTCCCCGTC GTCACCTCCA CCAACGTGTG GGGCAGCGTC GTCAAGGCGG TCGGCGGGGA CGCCGTCCAG GTCAAGGCCC TGATCGACGA CCCGTCCGCC GACCCGCACT CGTTCGAGAG CAAGCCCGCC GACATCGCCG CGGTCGCGGA CGCCAAGCTC GTCGTCGGCA ACGGCGGCGG CTACGACGAC TTCTTCGACA AGATCGTCGA CGAGTCCGCC CGGTCGGCCA AGCGCGTCGA CGCCTTCGCC CTCTCGGGCA AGGAGGAGAA CGAGCACGTC TGGTACGACC TGGCCACCGT CCGCAAGGTC GCCGACAAGG TCGCCGAGGA GCTCTCCGCG ATCGCCCCGG ACAAGAAGGA CGCCTTCACC AAGGGCGCGG CCGACTTCGG CACGGCGCTC GACGGCCTCA CCGCCAAGGC GGAGCGGATC AAGCCCGCCA AGGTCGTCGT GACCGAGCCG GTGCCCGCCT ACCTGCTGGA GACCGCGGGA GTCGAGGACC TCACCCCGGC CGAGTTCACC GAGGCCATCG AGAACGAGAC CGACGTCCCC GTCGCCGCCA TCGCCGCCAC CGGTGACCTG ATCGTGAACA AGCAGGTCAA CGCGCTGATC AACAACACCC AGACGGAGAA CGCGGTCACG GGCGACCTGG TCGCCAAGGC CGGGACCGCC GGGCTGCCCG TCGTGGGGAT GACCGAGACG CTGCCGGAAG GCGTCACGGG TTACGTTGAG TGGATGACGA AGCAGGTCGA CGAGCTGACC GCCGCGCTCG GGACGAAATG A
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Protein sequence | MTVRTTLITA VAVLGLTTAC GSADQGGSGS SDAPAGAVPV VTSTNVWGSV VKAVGGDAVQ VKALIDDPSA DPHSFESKPA DIAAVADAKL VVGNGGGYDD FFDKIVDESA RSAKRVDAFA LSGKEENEHV WYDLATVRKV ADKVAEELSA IAPDKKDAFT KGAADFGTAL DGLTAKAERI KPAKVVVTEP VPAYLLETAG VEDLTPAEFT EAIENETDVP VAAIAATGDL IVNKQVNALI NNTQTENAVT GDLVAKAGTA GLPVVGMTET LPEGVTGYVE WMTKQVDELT AALGTK
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