Gene Amir_0351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0351 
Symbol 
ID8324509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp380907 
End bp382007 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content70% 
IMG OID644940896 
ProductABC transporter related 
Protein accessionYP_003098166 
Protein GI256374506 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGG TCGCCTACGA CAAGGCGTCG CGGATCTTCT CCGGCAACCC CCCGGTGCGA 
GCCGTCGACG AGTTGTCCCT CGACGTGGCG GACGGCGAGT TCCTGGTTCT GGTCGGCCCG
TCGGGTTCCG GCAAGTCCAC CGCCCTGCGG ATGCTCGCGG GCCTGGAGGA CGTCGACGAG
GGCGCCATCA AGATCGGCGG CAAGGACGTC ACCAACGTGC CGCCGAAGGG CCGGGACATC
GCGATGGTGT TCCAGTCCTA CGCGCTGTAC CCGCACATGA CGGTCGCGGA GAACATGGGC
TTCGCGCTCA AGCTGCGCAA GGTCGCCAAG GAGGAGATCA AGCAGAAGGT CGCCGAGGCG
GCGGCCATGC TCGACCTCAC CAAGTACCTG GACCGCAAGC CGAAGGCGCT CTCCGGCGGT
CAGCGCCAGC GCGTCGCGAT GGGCCGCGCG ATCGTCCGCG AGCCCAGCGT GTTCCTCATG
GACGAGCCGC TGTCCAACCT GGACGCCAAG CTCCGCGTCG AGACCCGCGC GAACATCGCG
GCCCTCCAGC AGCGCCTGGG CACCACCACG ATCTACGTCA CGCACGACCA GGTCGAGGCC
ATGACCATGG GCCACCGGGT CGCCGTGCTC AAGGACGGCC TGCTCCAGCA GTGCGACACC
CCGCGCGCGC TGTACGACAA GCCTGCCAAC GCGTTCGTCG CGGGCTTCAT GGGCTCGCCC
GCCATGAACC TGAAGACCGT GCCGCTGACC GCCGAGGGCG CGAAGCTGGA CGGCCTGCTG
GTGCCGCTGG AGCGCACCAA GCTCGACGCC GCCTCCGGCA AGGGCCTGTC CGAGGTCGTC
TTCGGCGTGC GCCCCGAGTC GCTGGCGCTG GTCGGCGATG GCGAGCCGGG CATGGAGATG
GCCGTCGAGC TGGTCGAGGA GCTGGGCGCG GACGCGCTGC TGCACGGCGC GGTCCGCATC
GGCGACTCCT CCGAGCGGTT CGTGGTCCGC GTCGACGGCC GCACCCCGCC CGCGCTGGGC
CAGACCGTCA AGGTCGGCGT GCGCGACGCC TCCGAGGTGC ACCTGTTCCA CCCGGAGACC
GGGCTGCGCC TGACCGACTG A
 
Protein sequence
MAEVAYDKAS RIFSGNPPVR AVDELSLDVA DGEFLVLVGP SGSGKSTALR MLAGLEDVDE 
GAIKIGGKDV TNVPPKGRDI AMVFQSYALY PHMTVAENMG FALKLRKVAK EEIKQKVAEA
AAMLDLTKYL DRKPKALSGG QRQRVAMGRA IVREPSVFLM DEPLSNLDAK LRVETRANIA
ALQQRLGTTT IYVTHDQVEA MTMGHRVAVL KDGLLQQCDT PRALYDKPAN AFVAGFMGSP
AMNLKTVPLT AEGAKLDGLL VPLERTKLDA ASGKGLSEVV FGVRPESLAL VGDGEPGMEM
AVELVEELGA DALLHGAVRI GDSSERFVVR VDGRTPPALG QTVKVGVRDA SEVHLFHPET
GLRLTD