Gene Amir_0326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0326 
Symbol 
ID8324484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp355746 
End bp356216 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content72% 
IMG OID644940871 
Productaspartate 1-decarboxylase 
Protein accessionYP_003098141 
Protein GI256374481 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0853] Aspartate 1-decarboxylase 
TIGRFAM ID[TIGR00223] L-aspartate-alpha-decarboxylase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.437116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCGCA CGATGCTCAA GTCGAAGATC CACCGGGCCA CCGTCACCCA GGCCGACCTG 
CACTACGTCG GCTCGGTCAC CGTGGACGAG GACCTCATGG ACGCCGCCGA CCTGCTGGCG 
GGCGAGCAGG TCGCGATCGT GGACGTCACC AACGGGGCCC GCCTGGAGAC CTACGTCATC 
CCCGGCGAGC GCGGCTCCGG CGTCATCGGC ATCAACGGCG CCGCCGCGCA CCTGGTGCAC 
CCCGGCGACC TGGTCATCCT CATCGCCTAC GGGTCCATGG ACGACGCCGA GGCGCGCGCC 
TACCGGCCGC GCGTGGTGTT CGTCGACGCC GACAACAAGG TCGTGGAGCT GGGCTCGGAC 
GCCGCGCGCG CCCCCGAGGG CTCCGGGCTG CTCAGCGGCG CGGTGACCGC GCAGGCACTC 
GCCGAGACGG CCGACGCCGC CGCCCTCGAC GCGCTCATCC AGAACCAGTA G
 
Protein sequence
MFRTMLKSKI HRATVTQADL HYVGSVTVDE DLMDAADLLA GEQVAIVDVT NGARLETYVI 
PGERGSGVIG INGAAAHLVH PGDLVILIAY GSMDDAEARA YRPRVVFVDA DNKVVELGSD 
AARAPEGSGL LSGAVTAQAL AETADAAALD ALIQNQ