Gene Amir_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0324 
Symbol 
ID8324482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp353944 
End bp354837 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content79% 
IMG OID644940869 
Productputative cytoplasmic protein 
Protein accessionYP_003098139 
Protein GI256374479 
COG category[S] Function unknown 
COG ID[COG5495] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.471831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCGA CCCCCCGCCC CGCGCGCCTG GCCGCGGGCG TCATCTCGGC AGGCCGGGTG 
GGCTCGGTGC TCGGCGCCGC CCTCACCAGG GCGGGCCACG CCGTCTCCGC GGTCTCCGCC
GTCGGGGCCG CCTCCCTGCG CAGGGCCGAC GCCCTGCTCC CCGACGTCCC CGTGCTGCCC
CCGCCCGACG TGGCCGCGGG CGCCGACCTG GTCCTGCTCG CCGTCCCCGA CGACGAGCTG
CCCGGCCTGG TCAGGGGCCT GGTGGCCACC GGCTCGCTGC GCGCGGGCCA GATCGTGGTG
CACGTCAGCG GCGCCCAGGG CGTCGCCGCG CTCGCCCCCG CCGCCGAGGT GGGCGCGCTG
TGCCTGGCGC TGCACCCCGC CATGACCTTC ACCGGCCGCC CCGAGGACGT GGACCGGGTC
CGCGCCTGCA CCTTCGGGGT CACCGCCGCC GACGGCGACG ACATCGCCTG GAGCGTCGGC
GAGGCGCTCG TCGTGGAGAT CGGGGCCGAG GCCGTCCGGG TCCCGGAGTC CGCCCGCCCG
CTCTACCACG CCGCCCTCAC CCACGGCGCC AACCACCTGA TGACCCTGGT CGCCGACTGC
GCCGAGGCAC TGCGCGGCGC GGGCGTCGCC AACCCCGAGC GGGTCCTCGC GCCCCTCCTC
GGGGCCGCGC TCGACAACGC CCTGCGGCAC GGCGACCGCG CCCTCACCGG CCCCGTCGCC
AGGGGCGACA CCGGCACCGT CGCCAAGCAC CTCGCCGTGC TGGCCGACCG CGCCCCCGGA
ACCCTGGACG CGTACCGCGC GCTCGCCAGG CGCACCGCAG ACCGGGCCGA GTCCGCCGGG
CTGCTCCCGG CCGACCGCGC CACCGACGTC CGCACCACCC TCGACGAGGA CTGA
 
Protein sequence
MDATPRPARL AAGVISAGRV GSVLGAALTR AGHAVSAVSA VGAASLRRAD ALLPDVPVLP 
PPDVAAGADL VLLAVPDDEL PGLVRGLVAT GSLRAGQIVV HVSGAQGVAA LAPAAEVGAL
CLALHPAMTF TGRPEDVDRV RACTFGVTAA DGDDIAWSVG EALVVEIGAE AVRVPESARP
LYHAALTHGA NHLMTLVADC AEALRGAGVA NPERVLAPLL GAALDNALRH GDRALTGPVA
RGDTGTVAKH LAVLADRAPG TLDAYRALAR RTADRAESAG LLPADRATDV RTTLDED