Gene Amir_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0320 
Symbol 
ID8324478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp349936 
End bp351012 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content76% 
IMG OID644940865 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_003098135 
Protein GI256374475 
COG category[C] Energy production and conversion 
COG ID[COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00131388 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGATCA CCGTGGGCGT GGGAGCTGGG GCCAAGCACC TCGGGGTCGA CCGGGTGGTC 
GACCTGGGGC CGCTGCACCC CTCCGCGCAC GGGGCCTACC GGCTGCGGCT GACCGTGCGG
GACGACGAGG TGATCACCTC GGCCGAGCCG CTGGTCGGGC ACCTGCACCG GGGCGCGGAG
AAGCTGTTCG AGGTGCGCGA CTACCGGCAG GTGCTGACCC TGGCGAACCG GCACGACTGG
CTGGCGGCGT TCTGCAACGA GCTGGCCGTG GCGCTGGCGG TCGAGCGGAT GACCGGGATG
GACGTGCCGC CGCGCGCGCA GTGGCTGCGG GCGCTGCTGT GCGAGCTGAA CCGGGTCATG
GCGCACCTGG TGTTCCTGGC CCCGCTGACC GACCCGGTGG CGGCGGCGCG GGGGCGGGAG
GCCGTGCAGG CGGTGCTGGA GGAGGCGTCC GGCGGGCGCA TCCACTTCAT GGCCAACCGG
ATCGGCGGGC TGCGCGAGGA CGTCCCGGCG GGCTGGGCGG AGCGGGTGGC GGGCGCGCTG
GACGCGGTCG AGGTCCCCGA GGTGCCGACC GGCCTGGCGG GGTTGGGGGT GCTGAGCCGG
GCGGACGCGC TGGCGCGGGG CGTGACCGGC CCGATCGGGC GGGCGTCCGG GGTGGACCTG
GATTTGCGGC GCGACGACCC GCTGCCCGCG TACCGGGAGC TGGACGTGCG GCCGAGCGTG
CGGGACGGCG GCGACGCGCA CGCCAGGGTC GCGTGCATGG TCGACGACCT GGCGCAGGCG
GTGGCGCTGG CGCGCGAGTG CCTGCGACGC CTGCCGGGCG GCCCGGTGAA CCTGAGGCTG
CCCAAGGCGG TCAAGGCCCC GGAGGGGTCG GTGTACACGC GGGTGGAGGC GCCGCTCGGG
GTGTCGGGGG TGCACCTGGC GTCGCGCGGG GAGAAGACGC CGTGGCGGCT GAAGCTGCGG
ACGCCGTCGT TCAACAACGT GCAGGCGCTG TCCGCGCTGC TGCCGGGAAC CCCGGTGGCG
CAACTCCCCC TGGTGCTCGG CTCGTTCGCG GTCGTCGTCG GCGACATCGA CCGCTGA
 
Protein sequence
MQITVGVGAG AKHLGVDRVV DLGPLHPSAH GAYRLRLTVR DDEVITSAEP LVGHLHRGAE 
KLFEVRDYRQ VLTLANRHDW LAAFCNELAV ALAVERMTGM DVPPRAQWLR ALLCELNRVM
AHLVFLAPLT DPVAAARGRE AVQAVLEEAS GGRIHFMANR IGGLREDVPA GWAERVAGAL
DAVEVPEVPT GLAGLGVLSR ADALARGVTG PIGRASGVDL DLRRDDPLPA YRELDVRPSV
RDGGDAHARV ACMVDDLAQA VALARECLRR LPGGPVNLRL PKAVKAPEGS VYTRVEAPLG
VSGVHLASRG EKTPWRLKLR TPSFNNVQAL SALLPGTPVA QLPLVLGSFA VVVGDIDR