Gene Amir_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0303 
Symbol 
ID8324461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp330650 
End bp331321 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content79% 
IMG OID644940848 
Productnuclease (SNase domain protein) 
Protein accessionYP_003098118 
Protein GI256374458 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAGCA CCGCGCTGGT CCGCAGGACG CCGCTCCGGC TACTGCTGCT GGTCCCCGCC 
CTGCTGCTGA CGGCCTGCGC CGCGCAGCCG CTCGCCGCTC CCGCAGTGCC CGCGCCGGCC 
GCCGAGGACG CCGCCCCGGA CGCCGCCGAG CGGTGGGACC GGTCCGGGGC GTGGTCGACC 
CCCTCCCCCG CGCAGCCCGA CCCCGCCGAC CTCGCGCCCG CCCGCGCCTC GGGGGTCGTC 
GACGCCCGCA CGATCGCCGT GGCGGGCGGC GGCTCGGTCC GGCTGCTGGG GCTGGCCGAG 
CCCGGCGCCT GCTGGTCGCG CGCGGCGGCC GACTTCCTCG GCTCGCTGGT GGCGCAGAAG 
GACTTGGCGC TCGACGGCGC GTCCGTGCGC CTGCCCGGCG GGACCGACCT GTCCGCCCAG 
CTCGTCAGCC AGGGCATGGC TCGCGCCGAA CCGGACGCGG CCAGCACCCT GACCCGCGCC 
GAGGCCGCCG CCAGGAAGGC GGGCCTCGGC CTGTGGGGCG CGCCGTGCGG CGGCTCCGAC 
TCGGTGGTGA CGACGCCCGC GCCGACCACG CGCGCCCTGG CGCGGTGCAC CGCGAACACC 
TCCACGACCC CCGCCGGCCT GCCCGGCTCA CCAGTTCTCG ACCACGACAC GGATGGGGTG 
GCCTGCGCAT GA
 
Protein sequence
MESTALVRRT PLRLLLLVPA LLLTACAAQP LAAPAVPAPA AEDAAPDAAE RWDRSGAWST 
PSPAQPDPAD LAPARASGVV DARTIAVAGG GSVRLLGLAE PGACWSRAAA DFLGSLVAQK 
DLALDGASVR LPGGTDLSAQ LVSQGMARAE PDAASTLTRA EAAARKAGLG LWGAPCGGSD 
SVVTTPAPTT RALARCTANT STTPAGLPGS PVLDHDTDGV ACA