| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0291 |
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| Symbol | |
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| ID | 8324448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 315457 |
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| End bp | 318228 |
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| Gene Length | 2772 bp |
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| Protein Length | 923 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644940835 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_003098106 |
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| Protein GI | 256374446 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTGGAT CGACGCGGAC GAGGAAGAGC ACCGGGGGAA GTGCGGGCGG CAACCGGCGG
TTGGTGATCG TCGAGTCGCC CACCAAGGCG CGCAAGATCG CGTCCTACCT CGGCAACGGC
TTCGTCGTGG AGTCGTCCAA GGGGCACATC CGGGACCTGC CGCGCGGCGC GGCCGACGTG
CCCGCCAAGT ACAAGGGGCA GCCCTGGGCG CGGCTCGGCG TGGACGTCGA CCACGACTTC
GAGCCGCTCT ACATCGTCAC CCCGGACAAG AAGTCGACCG TCGCCGAGCT CAAGGAGCTG
CTCAAGGGCG TCGACGAGCT CTACCTCGCG ACGGACGGCG ACCGCGAGGG CGAGGCGATC
GCCTGGCACC TGCTGGAGAC CCTCAAGCCC TCGGTCCCGG TGCGCCGCAT GGTGTTCCAC
GAGATCACCG AGCCCGCGAT CCTCGCCGCC GCCGCCAGCC CGCGCGACCT GGACCTGAGC
CTGGTCGACG CGCAGGAGAC CCGCCGCATC CTGGACCGCC TCTACGGCTA CGAGGTCAGC
CCCGTGCTGT GGAAGAAGGT CATGCCGAAG CTGTCGGCGG GCCGCGTCCA GTCGGTGGCC
ACCCGCATCG TGGTCGAGCG CGAGCGCGAG CGGATGAAGT TCGTGACCGC CTCGTTCTGG
GACGTCTCGG CGACCATCGA CGCGGGCGCC GAGGCCACCC CGCGCCAGTT CGCGGGCAGG
CTCGTCTCCG TCGACGGCAC CAGGCTCGCC ACCGGCCGCG ACTTCGGCTC GGACGGCCGC
CTCAAGGACG GCGTCGAGGT CAAGGTGCTG GACGAGGCGC ACGCCCGCGC CATCGCCGAG
GGCCTGACCG GCGCGGCCAT GCGCGTGGCC TCCGTCGAGG AGAAGCCCTA CACGCGCAAG
CCGTACCCGC CGTTCATGAC CTCCACGATC CAGCAGGAGG CGGGCCGCAA GCTGCGCTTC
TCCGCCGACC GCACGATGCG GGCCGCGCAG AAGCTGTACG AGAACGGCTA CATCACCTAC
ATGCGAACCG ACAGCACCGC GCTGTCGGAG ACCGCCATCA CCGCGGCCCG CGCCCAGGCC
ACCGACCTGT ACGGCGCGCA GTACGTGGCC AAGGAGCCCC GGCAGTACAC CCGCAAGGTC
AAGAACGCCC AGGAGGCGCA CGAGGCCATC CGCCCGGCGG GCGAGGTCTT CCGCACCCCC
GGCCAGGTGG CCCGCGAGCT GGACTCCGAC GAGTACAAGC TCTACGAGCT GATCTGGCAG
CGCACCATCG CCTCCCAGAT GGCCGACGCG CGCGGCAACA CCACGAGCGT GCGCGTCGCG
GGCCGCACGG GCGGCGGCGA GGACGTGCTG TTCGCCTCCT CCGGCCGCAC GATCACGTTC
GCGGGCTTCC TCAAGGCGTA CGTGGAGACG GTCGACTCGG AGGCGGGCGG CAACGCCGAC
GACGCCGAGT CCCGGCTGCC GCAGCTGGTC GCCGAGCAGC CGGTGAGCGC CGCCGAGCTG
TCCGCCGACG GCCACTCGAC CTCGCCGCCG CCGCGCTTCA CCGAGCCCAG CCTGATCAAG
ACCATGGAGG ACCTGGGCAT CGGCCGCCCG TCCACCTACG CGTCGATCAT CAGCACCATC
CAGGACCGCG GCTACGTGTG GAAGAAGGGC TCCGCGCTGG TGCCCTCCTG GGTGGCGTTC
GCGGTGGTCG GGCTGCTGGA GCAGCACTTC GGCAGGCTGG TCGACTACGA CTTCACCGCC
GCGCTGGAGG ACGAGCTCGA CGGCATCGCC GAGGGCCGCC AGGAGCGCAC CACCTGGCTG
TCCGGCTTCT ACTTCGGCGG CGACGTCGGC CCCGAGTCCT CGATCGGCCG CTCCGGCGGG
CTCAAGAAGC TGGTCGGCTC CAGCGTCGAG GAGATCGACG CCCGCGAGAT CAACTCGATC
CCGCTGTTCA GCGACGAGGG CGGGCACACC GTCGTGGTCC GGGTCGGCCG GTACGGGCCG
TACCTGGAGC GCGAGGTCGA CGGCGCGTCG CAGCGGGCGA ACCTGCCCGA CGACCTGCCG
CCGGACGAGC TGAGCCTGGA GATCGCGGAG AAGCTGTTCG CGACCCCGCA GGAGGGCCGC
TCGCTGGGCA ACGACCCGGC GACCGGGCAC GAGATCGTGG CCAAGGAGGG CCGCTTCGGG
CCGTACGTCA CCGAGGTGCT GCCCGAGCCC GCCGAGGGCA AGAAGGCCGG GAAGCCTCGC
ACCAGCTCGC TGTTCAAGTC GATGTCGCTG GACACCGTGA CGCTGGAGGA CGCGCTGCGG
CTGCTGTCCC TGCCGCGCGT GGTCGGCGCC GACCCGGAGT CCGGCGCGGA GATCACCGCG
CAGAACGGCC GGTACGGGCC GTACCTCAAG CGCGGCACCG ACTCGCGGTC GCTGACCAGC
GAGGACCAGC TGTTCACGGT GACCCTGGAC GAGGCGCTGA AGATCTACGC CGAGCCCAAG
AAGCGCGGTC GCGCCGCGGC GGCCCCGCCG CTCAAGGAGC TGGGCAACGA CCCGGTGTCC
GGCAAGCCGA TGGTGGTCAA GGAGGGCCGC TTCGGCCCGT ACGTCACCGA CGGCGAGACC
AACGCCTCGC TGCGCAAGTC GGACAACGTG GAGACGCTGT CCGACGAGCG GGGCTCCGAG
CTGCTGGCGG AGAAGCGGGC CAAGGGGCCG AGCACGAAGA AGAAGCCGGC GGCCAGGACG
ACGAAGGCCG CCGCGAAGCC CGCGGCGAAG AAGCCCGCCG CGAAGAAGAC CCCGGCGAAG
TCGAAGGGCT GA
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| Protein sequence | MAGSTRTRKS TGGSAGGNRR LVIVESPTKA RKIASYLGNG FVVESSKGHI RDLPRGAADV
PAKYKGQPWA RLGVDVDHDF EPLYIVTPDK KSTVAELKEL LKGVDELYLA TDGDREGEAI
AWHLLETLKP SVPVRRMVFH EITEPAILAA AASPRDLDLS LVDAQETRRI LDRLYGYEVS
PVLWKKVMPK LSAGRVQSVA TRIVVERERE RMKFVTASFW DVSATIDAGA EATPRQFAGR
LVSVDGTRLA TGRDFGSDGR LKDGVEVKVL DEAHARAIAE GLTGAAMRVA SVEEKPYTRK
PYPPFMTSTI QQEAGRKLRF SADRTMRAAQ KLYENGYITY MRTDSTALSE TAITAARAQA
TDLYGAQYVA KEPRQYTRKV KNAQEAHEAI RPAGEVFRTP GQVARELDSD EYKLYELIWQ
RTIASQMADA RGNTTSVRVA GRTGGGEDVL FASSGRTITF AGFLKAYVET VDSEAGGNAD
DAESRLPQLV AEQPVSAAEL SADGHSTSPP PRFTEPSLIK TMEDLGIGRP STYASIISTI
QDRGYVWKKG SALVPSWVAF AVVGLLEQHF GRLVDYDFTA ALEDELDGIA EGRQERTTWL
SGFYFGGDVG PESSIGRSGG LKKLVGSSVE EIDAREINSI PLFSDEGGHT VVVRVGRYGP
YLEREVDGAS QRANLPDDLP PDELSLEIAE KLFATPQEGR SLGNDPATGH EIVAKEGRFG
PYVTEVLPEP AEGKKAGKPR TSSLFKSMSL DTVTLEDALR LLSLPRVVGA DPESGAEITA
QNGRYGPYLK RGTDSRSLTS EDQLFTVTLD EALKIYAEPK KRGRAAAAPP LKELGNDPVS
GKPMVVKEGR FGPYVTDGET NASLRKSDNV ETLSDERGSE LLAEKRAKGP STKKKPAART
TKAAAKPAAK KPAAKKTPAK SKG
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