| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0283 |
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| Symbol | |
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| ID | 8324440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 306276 |
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| End bp | 308699 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644940827 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003098098 |
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| Protein GI | 256374438 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.926162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGAACC AGGGACGTCG ACTGCTGGAC CGGGTGCTCG CCGGGGTTCC GCTCGGCGAG
GCCCCGCTGA CGCACGCCGA GGAGCTGCCC GGCCAGGACG CGCGGGAGGT CCCGTGGCCG
TCCTGGGCGG CCCCCGAGGT GGTGTCCGCG CTGGTGGAGC GGGGTGTGCC CGCGCCGTGG
TCGCACCAGG CGCAGGCGGC GGAGCTGGCG TGGTCGGGGC GGGACGTGGT GGTGGCGACC
GGCACCGCGT CGGGCAAGTC GCTGGCCTAC CAGCTGCCGG TGCTGAGCGC GCTCGTGGCG
GAGGGGCGGG CAACTGCTCT GTACCTGTCG CCGACGAAGG CGCTGGGGGC GGACCAGATC
CGCGCGGTGG AGGAGCTGGC GGTTCCGGGC GTGCGGGCGG CCTCGTTCGA CGGGGACACC
GCGATGGACG AGCGGGACTG GGTGCGGGCG CACGCGAACT GGGTGTTCAG CAACCCGGAC
ATGCTGCACC GGGGCGTGCT GCCGAACCAC GCGCGGTGGA TCCGGTTCTT CCGCGGGCTC
GCGTACGTGG TGGTGGACGA GTGCCACGCG TACCGGGGCG TGTTCGGCTC GCACGTGGCG
CTGCTGCTGC GGCGGTTGCG GCGGGTGGCG CGGCGGTACG GGGCGGACCC GGTGTTCGTG
CTGGCGTCGG CGACCGTGGC CGAGCCCGCG GCGTCCGCGG AGCGGCTGGT GGGGAAGCCG
TGCGCGGCGG TGGTGGAGGA CGGGTCGCCG CGCGCGGGGC GGGTGGTGGC GCTGTGGGAG
CCGCCGCTGC TGTCCGAGCT GGAGGGTGAG AACGGCGCGC CGGTGCGGCG GTCGGCGGGC
GCGGAGACGG CGCGCATCCT GGCGGACCTG GTGGTCGAGG GGGCGCGGTC GCTGGCGTTC
GTGCGGTCGC GGGTCGGGGC GGAGCTGACC GCGATGGGCG CGCGGCGGGT GCTGGCCGAG
GTGGACCCCG AGCTGCCGGG GCGGGTCGCC GCGTACCGGG GCGGGTACCT GCCGGAGGAG
CGGCGGGCGC TGGAGAGGGC GCTGGCGAGC GGGGACCTGC TCGGGGTGGC GACGACGAAC
GCGCTGGAGC TGGGCGTGGA CATCGCCGGG CTGGACGCGG TGGTGGTGGC CGGGTTCCCC
GGCACGCTGG CGTCGTTCTG GCAGCAGGCG GGGCGCGCGG GCCGGTCGGG CGGGGACTCG
CTGGTGGTGT TCGTGGCGCG GGACGACCCG CTGGACACGT ACCTGGCGCA CCACCCGGAG
GCGGTGCTGC GGCGGCCGGT GGAGGCGACC GTGCTGGACC CGTCGAACCC GTACGTGCTG
GCCCCGCACC TGGCGTGCGC GGCGGCGGAG CTGCCGCTGA CCGAGGAGTG CCTGGCGGGG
TTCGGGGAGG GCGCGCGCGA GGTGGTGGAC GGGCTGGTCG CGGACCGGGT GCTGCGGCGG
CGGCCCAACG GCGGCTGGTA CTGGACGGCG CGGGAGCGCC CGCAGGGGCA GGTGGACATC
CGGGGGTCGG GCGGCGAGCA GGTCGTGGTC GTGGAGGGCG ACACCGGGCG GGTGCTCGGC
ACGGTCGACC CGGCGGCGGC GCACTGGACG GTGCACGAGG GCGCGGTGTA CCTGCACCAG
GGCGAGTCGT ACGTGGTGGA CTCGCTGGAC CTGGAGGCCG GGATCGCGCT GGTGCGTGCG
GAGCGCCCGG ACTGGAGCAC GACGGCGCGG GACACCAAGG ACATCGTGGT GGTGCGGGTC
GAGCAGGAGC GGCGGTTCGC CGGCGTGCGG GTGTGCCTGG GCGAGGTGGA GGTGACCTCG
CAGGTGGTGT CGTACCTGCG GAAGCTGCCG TCCGGCCAGG TGGTCGACCA GGTGCCGCTG
GACCTGCCCG CGCAGGTGCT GCGCACGCGG GCGGTCTGGT ACGCGGTGGA CGATTCGTTG
CTGGGCAGCG CGCCGGGAGG CGCCGGTCTG GCTCCGGCGA CCGTCCCCGG CGCGCTGCAC
GCCGCCGAGC ACGCGGCGAT CGGCCTGCTA CCGCTCTTCG CGACCTGCGA CCGGTGGGAC
ATCGGCGGGG TGTCGACCGC GCTGCACCAG GACACCGGGG AGGCGACGGT GTTCGTGCAC
GACGGTCATC CGGGTGGAGC CGGATTCGCC GACCGCGGTT TCGCCGCGGT GGTCCCGTGG
TTGGCCGCGG CGCGGGAGGC CATCTCCTCG TGCGCGTGCC CTGCGGGGTG CCCGTCCTGC
GTGCAGTCGC CGAAGTGCGG CAACGGCAAC GATCCGCTGG ACAAGGCAGG TGGCGCGGCC
GTGCTGGACG TCGTCCTCAG AGCGGTGGAG AACCCACCCT CCGACGCCCA GCCCGACCGG
CTGGGTGGTT CTGGTGGAGC TGGTGGTTCT GGAGCTGGTG GATCTGGTTC TGGTCTGGCA
GGTGAAGCCG GCACTGCGCG TTGA
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| Protein sequence | MANQGRRLLD RVLAGVPLGE APLTHAEELP GQDAREVPWP SWAAPEVVSA LVERGVPAPW
SHQAQAAELA WSGRDVVVAT GTASGKSLAY QLPVLSALVA EGRATALYLS PTKALGADQI
RAVEELAVPG VRAASFDGDT AMDERDWVRA HANWVFSNPD MLHRGVLPNH ARWIRFFRGL
AYVVVDECHA YRGVFGSHVA LLLRRLRRVA RRYGADPVFV LASATVAEPA ASAERLVGKP
CAAVVEDGSP RAGRVVALWE PPLLSELEGE NGAPVRRSAG AETARILADL VVEGARSLAF
VRSRVGAELT AMGARRVLAE VDPELPGRVA AYRGGYLPEE RRALERALAS GDLLGVATTN
ALELGVDIAG LDAVVVAGFP GTLASFWQQA GRAGRSGGDS LVVFVARDDP LDTYLAHHPE
AVLRRPVEAT VLDPSNPYVL APHLACAAAE LPLTEECLAG FGEGAREVVD GLVADRVLRR
RPNGGWYWTA RERPQGQVDI RGSGGEQVVV VEGDTGRVLG TVDPAAAHWT VHEGAVYLHQ
GESYVVDSLD LEAGIALVRA ERPDWSTTAR DTKDIVVVRV EQERRFAGVR VCLGEVEVTS
QVVSYLRKLP SGQVVDQVPL DLPAQVLRTR AVWYAVDDSL LGSAPGGAGL APATVPGALH
AAEHAAIGLL PLFATCDRWD IGGVSTALHQ DTGEATVFVH DGHPGGAGFA DRGFAAVVPW
LAAAREAISS CACPAGCPSC VQSPKCGNGN DPLDKAGGAA VLDVVLRAVE NPPSDAQPDR
LGGSGGAGGS GAGGSGSGLA GEAGTAR
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