Gene Amir_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0278 
Symbol 
ID8324435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp303331 
End bp303888 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content77% 
IMG OID644940822 
Producttype II secretion system protein 
Protein accessionYP_003098093 
Protein GI256374433 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTCC TGCTGCTGGC GCTGGCCGTG CTGATCCTGC CGGGCGGGCG CTCCCCGTGC 
GCCCGCCTGC GCCCACCCGT CCAGCCGATC GCGAAACCCC GGCGTGCCAA GCGATCCCCA 
CCGGATCCGC TGGCGCTGGC CGAGACCTGG GACCTGTTCG CGGCGGCGCT GCGCTCGGGT 
CTCCCGGTGC CGAGCGCGCT GCACGCCGTC CTGCCGGGAA CCCCGCCGGG TCCGGCGGAG 
CGCCTCGGGC AGGTCCGCGA CCTGCTGGCA CTGGGCGCGG ACCCGGCGAC GGCCTGGGAC 
CCGGCCCTGG ACCACCCGGC CACCGCGCCG CTCGCCAGGT CGGCGAGGAG AACCGCCCGT 
TCGGGTGCGG CGCTGGCTGA CCAGGTGGCC GACCTGGCGG CGCGGCTCCG GGCGAGCGCC 
GCCGACGACG CGGAGAGCAG GGCCCAGCGG GCGGCGGTCC TGGTGGCCGG CCCGCTGTCC 
CTGTGCTTCC TGCCCGCGTT CCTGTGCCTG GGGGTGGCGC CGGTCCTGAT CGGCATCGCC 
TCCGGATTGA ACCGCTGA
 
Protein sequence
MSFLLLALAV LILPGGRSPC ARLRPPVQPI AKPRRAKRSP PDPLALAETW DLFAAALRSG 
LPVPSALHAV LPGTPPGPAE RLGQVRDLLA LGADPATAWD PALDHPATAP LARSARRTAR 
SGAALADQVA DLAARLRASA ADDAESRAQR AAVLVAGPLS LCFLPAFLCL GVAPVLIGIA 
SGLNR