| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0258 |
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| Symbol | |
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| ID | 8324415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 280353 |
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| End bp | 281540 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644940802 |
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| Product | Colicin V production protein |
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| Protein accession | YP_003098073 |
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| Protein GI | 256374413 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.73696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACTGGG TAGACCTGCT GGTGCTGGCG ATAGCCGCGT TCGCCGCGGT GTCGGGCGCC
AGGCAGGGCA TGGTCGTGGC CGTGCCCGCT TTCATCGGCG TGCTCGTCGG CCTGCTGCTG
GGCACGCAGC TCGCGCCCGT GGTGGTGTCG CGCTTCGACA ACGTGGTGAC CAAGGTCGTC
TTCGCGGTCG GCGTGGTGGT GCTCCTGGTC GCGCTCGGCG AGACGCTGGG CGTCTACATC
GGACGCGCGG TCAAGTCCAA GGTCAACGCG ACCCCGCTGC GCGGCGTGGA CAACGCCCTC
GGCGCGGTCG TGCAGGGCGC GGTGGTGTTC GTGGTGGCGT GGATGATCGC GCTGCCGCTC
ACCTCGGTGG CCGGCCTGCC GACGCTGGCC AAGGGCCTCA ACCAGTCCGC GATCCTGTCC
ACCGTGGACG GAGCGATGCC GCAGGCGGCC CGCGACCTGT CCGAGGACCT GCAGAACCTG
TTCGACGTGT CCGGCTTCCC GGCCGCGATG GACCCGTTCA ACCGCACCCC GCTCAGGGAG
GTCTCCCCGC CCGACCCCGA GCTCAGCGGC GACCCCGTGG TGCAGCGGCT GCGGCCGAGC
GTGCTGAAGG TGCGCGGCCG GGCGCCCTCG TGCTCGCGGG CGCTGGAGGG CACCGGGTTC
GTGATCGCGC CGGAGCGGGT CATGACCAAC GCGCACGTCG TCGCGGGCAC CACCGAGGTC
AGCATCGAGG TCGGCCAGGG CAAGTTCGAC GCGACGGTCG TGCACTACGA CGCGCAGACC
GACCTGGCGA TCCTGGCCGT GCCGAACCTG GACGCGCAGC CACTCCAGTT CCGCACCGAC
GAGATCGACC AGGGCGAGGA CGGCATCGTG CTCGGCTACC CGCTGGACGG CCCGTACACG
GCGTCCGAGG CGCGGGTGCG CGAGCGCATC CCCATGCTGC GCGGGCCGGA CATCTACGAC
GCGCAGACCG TGACGCGGGA CGTCTACACG ATCCGGGCGA AGGTCCGCAG CGGCAACTCC
GGCGGCCCGC TGGTCGACCG GGAGGGCCGG GTCATGGGCG TGGTGTTCGG CGCGGCCGTG
GACGACCAGG AGACCGGGTT CGTGCTGACC CCGCAGGAGG TCGCCGACGA GGTGGCCAAG
GCGCCGGGGC TGGTGCGGCG CGCGCCCACG CAGACCTGCG CGTCCTGA
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| Protein sequence | MNWVDLLVLA IAAFAAVSGA RQGMVVAVPA FIGVLVGLLL GTQLAPVVVS RFDNVVTKVV
FAVGVVVLLV ALGETLGVYI GRAVKSKVNA TPLRGVDNAL GAVVQGAVVF VVAWMIALPL
TSVAGLPTLA KGLNQSAILS TVDGAMPQAA RDLSEDLQNL FDVSGFPAAM DPFNRTPLRE
VSPPDPELSG DPVVQRLRPS VLKVRGRAPS CSRALEGTGF VIAPERVMTN AHVVAGTTEV
SIEVGQGKFD ATVVHYDAQT DLAILAVPNL DAQPLQFRTD EIDQGEDGIV LGYPLDGPYT
ASEARVRERI PMLRGPDIYD AQTVTRDVYT IRAKVRSGNS GGPLVDREGR VMGVVFGAAV
DDQETGFVLT PQEVADEVAK APGLVRRAPT QTCAS
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