| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0213 |
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| Symbol | |
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| ID | 8324369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 237857 |
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| End bp | 239653 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644940758 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_003098030 |
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| Protein GI | 256374370 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.59936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA TCTCGCCCGA CGCGTACAGC ACCGGCACCA GCCGCATCCG CCCTCCCGCC
CGCCCGGCCC CCGAGGGCCA GCCCGCGTGG AACCCGCAGC GCGGCACGTC CATGCCGGTG
CACCGCTACC GCCCGTTCCA CGAGCTGGTC GAGACCGTCG ACCTGCCCGA CCGCACCTGG
CCCGCCAAGC GGATCACCCA GGCCCCGCAG TGGTGCGCGG TGGACCTGCG CGACGGCAAC
CAGGCGCTGA TCGACCCGAT GTCGCCCGCC CGCAAGCGCA AGATGTTCGA CCTGCTGGTG
CGCATGGGCT ACAAGGAGAT CGAGGTCGGC TTCCCGGCGG CATCGCAGAC CGACTTCGAC
TTCGTCCGCG AGATCATCGA GGACGGCGCG GTCCCGGACG ACGTCACCAT CCAGGTGCTG
ACCCAGTGCC GCCCTGAGCT GATCACCCGC ACGTACGAGT CGCTGCGCGG CGCGCACAAG
GCGATCGTGC ACTTCTACAA CTCCACCTCG GTGCTCCAGC GCAAGGTCGT GTTCCGCGCC
GACCGCGACC GGATCAAGGC GATCGCCACC GACGCGGCGC GGTTCGCGCT GGAGGAGGCG
AAGAAGTACC CGGAGACCGA GTTCCGCTAC GAGTACTCGC CCGAGTCCTA CACCGGCACC
GAGCTGAGCT ACGCGCTGGA GGTGTGCGAC GCGGTCTCGG AGATCATCGC GCCCACCCCC
GAGCTGCCGA TGGTGATCAA CCTGCCCGCG ACCGTCGAGA TGGCGACGCC GAACGTGTAC
GCCGACTCGA TCGAGTGGAT GTCGCGCCAC CTGGCCCGGC GTGACTCGAT CGTGCTGTCG
CTGCACCCGC ACAACGACCG GGGCACCGGC GTGGCCGCCG CCGAGCTGGG CTACCTGGCG
GGCGCGGACC GCATCGAGGG CTGCCTGTTC GGCAACGGCG AGCGCACCGG CAACGTGTGC
CTGGTGACGC TGGGCATGAA CATGTTCAGC CAGGGCGTCG ACCCGCAGAT CGACTTCTCC
GACATCGACG AGGTCCGCCG CACGGTCGAG TACTGCAACC AGCTGCCCGT GCACGAGCGG
CACCCGTACG GCGGCGACCT GGTGTTCACC GCGTTCTCCG GCAGCCACCA GGACGCCATC
AAGAAGGGCT TCGAGGCGCT GGAGGCGGAC GCGAAGGACG CCGACAAGCA CGTCGACGAG
TACCCGTGGG AGGTCCCGTA CCTGCCCATC GACCCGAAGG ACGTCGGCCG CAACTACGAG
GCGGTCATCC GGGTCAACTC CCAGTCCGGC AAGGGCGGGG TGGCGTACGT GATGAAGAGC
GAGCACCACC TGGACCTGCC GAGGCGGCTG CAGGTGGAGT TCTCGCGGGT GATCCAGGAG
GTCACCGACA CGCAGGGCGG CGAGGTCGGC CCGAAGGAGA TCTGGGACGC CTTCGCGGAC
GAGTACCTGC AGGGCGTCGC GCCGCTGCGG CTGCTGAAGC ACGAGCTGTC CAGCGACGGC
ACCGGCTCGG AGTCGATCAA GACCGTGCTG GTGGTCGACG GCGAGACCCA GGACGTGACG
GGCACCGGCA ACGGGCCGAT CGCCGCGTTC GTGGACGCGC TGGCGTCGGT GGGCTACGAC
GTCCGGGTGC TGGACTACTC GGAGCACGCC CTGTCCTCCG GCGACGACGC CCGCGCGGCC
TCGTACGTGG AGTGCTCGGT GGGCGACCGC GTGCTGTGGG GCGTGGGCGT CGACAGCTCC
ACCGTGGCCG CGTCGCTGCG GGCCCTGGTG TCGGCCGTGA ACCGCGCCAA CCGCTAG
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| Protein sequence | MSTISPDAYS TGTSRIRPPA RPAPEGQPAW NPQRGTSMPV HRYRPFHELV ETVDLPDRTW
PAKRITQAPQ WCAVDLRDGN QALIDPMSPA RKRKMFDLLV RMGYKEIEVG FPAASQTDFD
FVREIIEDGA VPDDVTIQVL TQCRPELITR TYESLRGAHK AIVHFYNSTS VLQRKVVFRA
DRDRIKAIAT DAARFALEEA KKYPETEFRY EYSPESYTGT ELSYALEVCD AVSEIIAPTP
ELPMVINLPA TVEMATPNVY ADSIEWMSRH LARRDSIVLS LHPHNDRGTG VAAAELGYLA
GADRIEGCLF GNGERTGNVC LVTLGMNMFS QGVDPQIDFS DIDEVRRTVE YCNQLPVHER
HPYGGDLVFT AFSGSHQDAI KKGFEALEAD AKDADKHVDE YPWEVPYLPI DPKDVGRNYE
AVIRVNSQSG KGGVAYVMKS EHHLDLPRRL QVEFSRVIQE VTDTQGGEVG PKEIWDAFAD
EYLQGVAPLR LLKHELSSDG TGSESIKTVL VVDGETQDVT GTGNGPIAAF VDALASVGYD
VRVLDYSEHA LSSGDDARAA SYVECSVGDR VLWGVGVDSS TVAASLRALV SAVNRANR
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