Gene Amir_0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0210 
Symbol 
ID8324366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp233255 
End bp234397 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content73% 
IMG OID644940755 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003098027 
Protein GI256374367 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.323945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCGG CAGAACCCGT TCAGGCCGAG CGGGCCCCCG AGGGCGACGC CCTCATCTCG 
ATCGAGGGCA TCCAGGTCCA CTTCCCGATC AAGCGGGGCG TCTTCCTGGA CCGCACCGTC
GGCCACGTGT ACGCGGTCGA CGGCGTGGAC CTGAGCATCC GCAAGGGCGA GACGTACGGC
CTGGTCGGCG AGTCCGGCTG CGGCAAGTCC ACGCTCGGCA GGGCCGTGCT GCGGCTCACC
GAGCCGACCG GCGGCCGGGT CGTGTTCGAC GGCACCGACC TGTCCACGCT CAAGGGCGAG
GCGCTGCGCA CCATGCGGCA GCGGATGCAG ATGGTCTTCC AGGACCCGAT GTCCTCGCTG
GACCCGCGCC AGTCGGTCGA GTCGATCCTG GTCGAGGGGC TGCGCGCGCA CGGGCTGGAC
AAGGGCAAGG AGGCCACCGG CAAGCGCCTG CGCGAGCTGC TGGCCGCCGT GGGCCTGCCG
TCGACCTCGC TGCGCAAGTA CCCGCACGAG TTCTCCGGCG GCCAGCGCCA GCGCATCGGC
ATCGCCCGCG CGCTGGCGGT CGAGCCCGAC CTGATCATCG CCGACGAGCC GGTGTCCGCG
CTCGACGTGT CGGTGCAGGC GCAGGTGGTG AACCTGCTGG AGGAGCTGCA GGAGAAGCTG
GGGCTGACCT ACCTGGTGAT CGCCCACGAC CTCGCGGTCG TGCGGCACAT CGCCGACCGG
GTCGGCGTCA TGTACCTGGG CGGGATCGTG GAGGAGGCGA GCTCGGACGG GCTGTACGCC
GAGCCGCTGC ACCCGTACAC CAGGGCGCTG CTGTCGGCGA TCCCGGTGCC GGACCCCGTG
GTGGAGGACC GGCGCGAGCG CATCCTGCTC AAGGGCGACC TGCCCTCGCC CGCCAACCCG
CCGACGGGCT GCCGCTTCCA CACGCGGTGC CCGTGGCGGC AGGCGACCAG GTGCGACACC
GAGCGGCCCG CGCTGCGCGA GGTGCTGCCC GGCCACCGGG TGGCCTGCCA CTGGGCGGAG
GACATCCGCT CCGGGGCGAT CAAGCCGCAC GAGGTCGAGG CGGTGCTGGT GGAGGAGGAC
GGGATCTCCC CGGACGTCCC GCTCGTCGGG CCCGCCTCGG TCACCGAGGT GCTGAACCCG
TAG
 
Protein sequence
MTAAEPVQAE RAPEGDALIS IEGIQVHFPI KRGVFLDRTV GHVYAVDGVD LSIRKGETYG 
LVGESGCGKS TLGRAVLRLT EPTGGRVVFD GTDLSTLKGE ALRTMRQRMQ MVFQDPMSSL
DPRQSVESIL VEGLRAHGLD KGKEATGKRL RELLAAVGLP STSLRKYPHE FSGGQRQRIG
IARALAVEPD LIIADEPVSA LDVSVQAQVV NLLEELQEKL GLTYLVIAHD LAVVRHIADR
VGVMYLGGIV EEASSDGLYA EPLHPYTRAL LSAIPVPDPV VEDRRERILL KGDLPSPANP
PTGCRFHTRC PWRQATRCDT ERPALREVLP GHRVACHWAE DIRSGAIKPH EVEAVLVEED
GISPDVPLVG PASVTEVLNP