Gene Amir_0209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0209 
Symbol 
ID8324365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp232263 
End bp233258 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content72% 
IMG OID644940754 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003098026 
Protein GI256374366 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.065739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTGC TGGAAGTCCG CGACCTCACC GTCGTCTTCG AGCGCAAGGG CGAGCAGCCC 
TTCACCGCCG TGGACGGGGT CAGCTTCGAC GTCGAGCCCG GCCAGACCGT CGGCCTGGTC 
GGTGAGTCCG GCTGCGGCAA GTCGGTGACC TCCCTCGCGA TCATGGGCCT GCTGCCCAAG 
CGCGGGGCGC GGATCACCGG GTCGGTCGGC TACGAGGGCA CCGACCTGCT GAAGCTGTCC 
GACCGCCAGA TGCGCGACCG GCGCGGGCGC GACCTGGGCA TGGTGTTCCA GGACCCGCTG 
TCCTCGCTCA ACCCGGTCAT CCCGATCGGC CTCCAGGTCA CCGAGGTGCT GGAGCGGCAC 
CGGGGCATGG CCCGCAAGCA GGCCATGGTC GAGGCGGCCG ACCTGCTGGA CAAGGTCGGC 
ATCCCCGACC CGACCCGGCG GCTCTCCGAG TACCCGCACC AGCTGTCCGG CGGGATGCGC 
CAGCGCGCGC TGATCGCCAT CGCGCTCGCC TGCCGCCCCC GGCTGCTCAT CGCGGACGAG 
CCGACCACGG CGCTGGACGT GACCATCCAG GCTCAGATCC TGGCGCTGCT CAAGGAACTG 
GTGCAGGACA CCGGGACCGC GCTGGTCATG ATCACGCACG ACCTGGGCGT CGTCGCCGGC 
CTGTGCGACG AGGTGAACGT GCTCTACGGC GGTCGCGTCG TGGAGAAGGC GCGGCGGCAC 
GAGCTCTTCG GGCAGCCGCG CCACCCGTAC ACCCACGGCC TGCTGGCCTC CATCCCGAGG 
CTGGACGCGC CGCGCGGCGA GCGGCTGGTG CCCATCAAGG GCTCGGTCGC CGACAACATC 
CCGTGGGAGG GCGGCTGCGC GTTCGCGCCG CGCTGCCCGA ACGCGCTGGA CGTGTGCGTG 
ACGACCACGC CGGAGCAGGA GGACCTCGGC GGCGGCAGGC TGCTGCGCTG CCACAACCCG 
GTGCGGCCCG AGGTCGCAGA GGAGGTGGGC GCGTGA
 
Protein sequence
MALLEVRDLT VVFERKGEQP FTAVDGVSFD VEPGQTVGLV GESGCGKSVT SLAIMGLLPK 
RGARITGSVG YEGTDLLKLS DRQMRDRRGR DLGMVFQDPL SSLNPVIPIG LQVTEVLERH 
RGMARKQAMV EAADLLDKVG IPDPTRRLSE YPHQLSGGMR QRALIAIALA CRPRLLIADE 
PTTALDVTIQ AQILALLKEL VQDTGTALVM ITHDLGVVAG LCDEVNVLYG GRVVEKARRH 
ELFGQPRHPY THGLLASIPR LDAPRGERLV PIKGSVADNI PWEGGCAFAP RCPNALDVCV 
TTTPEQEDLG GGRLLRCHNP VRPEVAEEVG A