Gene Amir_0207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0207 
Symbol 
ID8324363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp230308 
End bp231318 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content69% 
IMG OID644940752 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003098024 
Protein GI256374364 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.290985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCCGCT ACACCATCCG ACGGCTGATC CAGCTCGTCG TCGTGGTGCT GGTGCTCTCG 
TTGCTCGTCT TCTCGTGGTT GCGCGCACTC CCGGGAGGGC CGGCATCGGC CCTCCTGGGG 
GAGCGCGGCA CGGAAGAGTC ACGGGCGGCG TTGAGCAAGC AGCTCGGCTT GGACCAGCCG 
ATCTTCGTCC AGTACTTCAA ATTCCTGGGC CGCGCCCTCA CCGGGGACTT CGGCAACTCG 
ACCGGCGTGC AGCCGGGTGA CGCGGTGGTG GACATCTTCC TCCAGCGCTT CCCCGCCACG 
ATCGAGCTGA GCGCCTTCGC CATGCTGATC GCGATCGCGC TGGGGATCCC CCTGGGCTAC 
CTGGCCGCCC GCAAGCGCGG CGGCCTGTTC GACAACCTGA GCGTGGGCGG CTCGCTGATC 
GGCGTCGCCG TGCCGGTCTT CTTCCTGGCC TACCTGCTCA AGTACGTCTT CGCGTCGCAG 
CTGGGCTGGC TGCCCTCCGC GGGCAGGCAG TCCGCCGGCC TCGACGCGAC CCGCGTCACC 
GGCTTCTTCG TCCTCGACGG CTTCCTCACG CAGGAGTGGG ACGCCGCGCT GAACGCGCTG 
ACGCACCTGG TCCTGCCCGC GTGCGCGCTG GCCACCATCC CGTTCGCGGT GATCTTCCGG 
ATCACCAGGG CGGCGGTGCT CGACGTGCTG AACGAGGACT ACGTGCGCAC CGCCGAGTCC 
AAGGGCCTGC TGGGCAGCGT CATCCGCCGC AGGCACATCC TGCGCAACGC GATGCTGCCC 
GTGGTCACCA CCATCGGCCT GCAGATCGGC GCGCTGCTGG CAGGCGCGGT GCTCACCGAG 
AAGGTGTTCG CCTTCCCCGG CGTCGGCGAG GCGCTGGCCA TCGGGTTCGA GCGCAGGGAC 
TACCCGGTCC TGCAGATGTT CATCCTGGTC GCCGCCATGA TCTACGTGCT GGTGAACCTG 
CTGGTGGACC TGTCGTACGC GCTCATCGAC CCTCGGATCA GGGCGAGGTA G
 
Protein sequence
MLRYTIRRLI QLVVVVLVLS LLVFSWLRAL PGGPASALLG ERGTEESRAA LSKQLGLDQP 
IFVQYFKFLG RALTGDFGNS TGVQPGDAVV DIFLQRFPAT IELSAFAMLI AIALGIPLGY 
LAARKRGGLF DNLSVGGSLI GVAVPVFFLA YLLKYVFASQ LGWLPSAGRQ SAGLDATRVT 
GFFVLDGFLT QEWDAALNAL THLVLPACAL ATIPFAVIFR ITRAAVLDVL NEDYVRTAES 
KGLLGSVIRR RHILRNAMLP VVTTIGLQIG ALLAGAVLTE KVFAFPGVGE ALAIGFERRD 
YPVLQMFILV AAMIYVLVNL LVDLSYALID PRIRAR