Gene Amir_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0197 
Symbol 
ID8324347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp209402 
End bp210040 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content73% 
IMG OID644940737 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003098014 
Protein GI256374354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTATGTA TCTTGGTGCC CATGGCGAGG CAGAAGGACC CGGCGGTCCG CACCCTCCTC 
GTGGAGCGCG CCGCGCACAT GCTGCGCGTC CGCGAGCCGA TCACGCTCCG CTCGCTCGTC
GCGGGCACCG GGGTGTCCAC GATGGCCGTC TACACCCACT TCGGGAACAT GGACGGGATG
TGGATGGCGG TGCGCCAGGA GGGCTTCACC CGGCTCGCCC GCCGGTTCGC CGAGGTCCCG
GTGACCACCG ACCCGGTCGC CGACCTGACC GCCCTCGTCG CCGCGTACCT CGGCAACGCG
CTGGAGCACC CCGACCTGTA CCGGGTCATG TTCGACGCGA ACTTCGACCT GGAGGACCTG
AAGGCCGCCG ACGCCACGCT GGAGCACATG GTCCAGGCGG CCCTGCGCGC CCAGGACGCC
GGCCGCTTCC ACGCGGGGAC CACGCCGCTG GACCTGGCGA CCCAGAGCTG GGCGGTGGGG
CACGGCGTGG TGTCGCTGGT GGCGAACGGC CCGCTGCCCC GCGAGACCCT CGCGCACTGC
CCGGTCCTGC TGGAGGCCCT GTTCACGCGC ACCGGCGACG AGCCGGGCCG CTGCGCGGAC
TCGGTGGCGC GCGGCTGGGA CCCGGCGCTG GCCGGATAA
 
Protein sequence
MLCILVPMAR QKDPAVRTLL VERAAHMLRV REPITLRSLV AGTGVSTMAV YTHFGNMDGM 
WMAVRQEGFT RLARRFAEVP VTTDPVADLT ALVAAYLGNA LEHPDLYRVM FDANFDLEDL
KAADATLEHM VQAALRAQDA GRFHAGTTPL DLATQSWAVG HGVVSLVANG PLPRETLAHC
PVLLEALFTR TGDEPGRCAD SVARGWDPAL AG