| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0196 |
|---|
| Symbol | |
|---|
| ID | 8324346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 208921 |
|---|
| End bp | 209328 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644940736 |
|---|
| Product | Endoribonuclease L-PSP |
|---|
| Protein accession | YP_003098013 |
|---|
| Protein GI | 256374353 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCA CGCTGGTGAA CCCGGACGGG CTGCCGCAGG TCGAGGTCTA CCGGCAGGTG
GCGATCGGCG CCGGGGCGAA GCTGGTGTTC GTCGCCGGGC AGGTGGCGCG CGACGGCGAC
GGCAACCGGA TCGGCGAGGG CGACCTGGCC GCGCAGGCCG AGCAGGCCTA CCTGAACGTC
GGCACCGCGC TCGCCGCCGC GGGCGCGACG CTGGGCGACC TCGCCAAGCT GACGATCTAC
GTCGTCGACT GGCGGCTCGA CCTGATGCCC GTGCTCATGG AGGGCGTCAA CCGGGCGTTC
GCGCGGCTCG GCGGGAGTTC GCTCGCGCCC GTGACGCTGA TCGGCGTCGC CGCGCTGGCC
GAGCCGGACC TGCTGATCGA GATCGAGGCC ACCGCCGTGG TCGAGTAG
|
|---|
| Protein sequence | MAITLVNPDG LPQVEVYRQV AIGAGAKLVF VAGQVARDGD GNRIGEGDLA AQAEQAYLNV
GTALAAAGAT LGDLAKLTIY VVDWRLDLMP VLMEGVNRAF ARLGGSSLAP VTLIGVAALA
EPDLLIEIEA TAVVE
|
|---|
| |