| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0194 |
|---|
| Symbol | |
|---|
| ID | 8324344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 204230 |
|---|
| End bp | 205435 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644940734 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003098011 |
|---|
| Protein GI | 256374351 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCGA GTCCCCCGGC GACCGGCGAG AACATCACGG TGCTGCGCAA GGCCGCAGGG
CTGACACAGC GCCAGTTAGC CACCCGCGCG AACATCTCCT TAAGCCTGCT GTCCAAGGTG
GAGGTTGGTG ATCGCGCCGC CAGCAACGCG CTGGTTGCCG CCGTCGCCCG CGCGCTCGCC
GTGCCGATCG AGCGCGTCCA CGGCCAGCCT TACCAAGCCG AGCACCGCGA GAGCGGGGTG
GACAACGCCA TCGACCGGCT GCGCGCCGCA CTTCGCGGCT ACGACCTGGC CCCGGATGAG
AGCGTCCCGC TCCGGCCCGT CGAAAGACTC CGAGCCGACG TTGAAGGGGT GAGTCGGCGG
CGGCGTTCCG GGCGCTACTC CCGGCTTGCG TTCACCCTCC CTGCCCTGCT GGAAGAGCTG
ACTCTTGCCC GGCACAGCGT CACCGGCGCC CGTGAGCAGG AAGAGGTCTT CGAGCTGCTG
GTGATGGCGT TCTACGCCGC GCACGGCCTG GCCTACCGGC TGGGCTACGC CGATCTTGCC
GAGTCGATCG AGCACAAGCT GGGGTGGGCA GCCGACCGGA CCAGCGACCC GCTCGCCGTG
GGACTGGCGC AGTGGACCAG GGTGAACGCC TTCCAGGCCG CAGGGGACTA CGGCCGTGGC
TTGCAGTTGC TCGACAACGC CCGCCACCAG CTCGATGAGC ACGTGGACCT GACCGGCTCG
GCTGCGGTCA CCGTGTACGG CAGCCTGCAC CTGCGGGCCA GCACTCTCGC TTCCCGTGCC
GGTGACGCCG ACACCGCCCG CGCCCACCTC GGCGCTGCCG CTGAACTCGG CGTGCGCGTC
CGCCGCGACC GGGTGCACTA CCAGCTGACC TTCGGTCCGA CGAACACCGC GATCCACGAC
GTCGCCGCTT CGGTCGAGCT GGGCGACCCG GAACGCGCCG TTCGCATCGG TGCGGACTTC
AAGCGGGGGA GCGGCCTGCC CGCCACTCGG ATCGGCCACC TGCACATCGA CCTGGCGCGA
GCACACCTGA TGCTCGGCGA CCGGCCCGGC ACCCTGCGCG CGCTGGAACA AGCCCGCCGC
GCTGCGCCGG AGCAGACCCG GTTCCACCCG ATGGTCCGGG AGACGACCCG CGTCCTGGTC
AGCCTGCACC GCCGCAGCAA CCCGGACCTG AGCAAGTTCG CCACCTGGAT CGGGCTCGCT
GACTGA
|
|---|
| Protein sequence | MAASPPATGE NITVLRKAAG LTQRQLATRA NISLSLLSKV EVGDRAASNA LVAAVARALA
VPIERVHGQP YQAEHRESGV DNAIDRLRAA LRGYDLAPDE SVPLRPVERL RADVEGVSRR
RRSGRYSRLA FTLPALLEEL TLARHSVTGA REQEEVFELL VMAFYAAHGL AYRLGYADLA
ESIEHKLGWA ADRTSDPLAV GLAQWTRVNA FQAAGDYGRG LQLLDNARHQ LDEHVDLTGS
AAVTVYGSLH LRASTLASRA GDADTARAHL GAAAELGVRV RRDRVHYQLT FGPTNTAIHD
VAASVELGDP ERAVRIGADF KRGSGLPATR IGHLHIDLAR AHLMLGDRPG TLRALEQARR
AAPEQTRFHP MVRETTRVLV SLHRRSNPDL SKFATWIGLA D
|
|---|
| |