Gene Amir_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0163 
Symbol 
ID8324312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp178054 
End bp178677 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content75% 
IMG OID644940702 
Productprotein of unknown function DUF1089 
Protein accessionYP_003097980 
Protein GI256374320 
COG category[S] Function unknown 
COG ID[COG3554] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.786623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCACCG CCAGGACGGC CGAGCGCGCC ACCGCCCAGC AGGGCGAGTC CCGCGCCGCC 
GCTCGCATGG TCACCTGGCA GGGGTGCTCG GTGCCCAGGC TGGAGCAGGT CCGCGTGCTG 
GTGTCCGAGC ACAAGCTCAG GGCGTCCGGC CGGATCGTCG CCTCGGGGCC CGCCGAGCAG 
TTCAACGGCT CCTTCGAGCT GTCGGTCGGC GAGGACGGCG CCGTGACGCG GCTGCTGCTG 
CGCACCGCCA CCGTCGCCGA GGAGCGGCAC GTCTCGCTCA GCCGGTCCTC CGACGGCGTC 
TGGATGGTCG ACCGGGGCCA CGGCGGTGAG CGGGCCGACT TCGACGGCGC GGTCGACGTG 
GACGTGGAGT TCGCGGTGCT GTTCGCGGCC ATCCCGGTCC GGCGGCTGGG CCTGCACCGG 
GAGCCCGGTG AGGCCGAGCT GCCCGTGGTG CGGGTCAGCC TGCCCGACCT GGACGTCACC 
GTCGTGCGGC GCGGCTACCG CACCGCGTCG GTCGGCGACG GCGGCTCGGT CGTGGCGATC 
CGCGCGGAGG ACGGCGAGCA GGACGTCACC GTGGACGCCG AGGGGCTGGT CGTGGACTAC 
CCGGACGTGG CGCAAAGGAT CTGA
 
Protein sequence
MSTARTAERA TAQQGESRAA ARMVTWQGCS VPRLEQVRVL VSEHKLRASG RIVASGPAEQ 
FNGSFELSVG EDGAVTRLLL RTATVAEERH VSLSRSSDGV WMVDRGHGGE RADFDGAVDV 
DVEFAVLFAA IPVRRLGLHR EPGEAELPVV RVSLPDLDVT VVRRGYRTAS VGDGGSVVAI 
RAEDGEQDVT VDAEGLVVDY PDVAQRI