Gene Amir_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0154 
Symbol 
ID8324303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp168872 
End bp169687 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content75% 
IMG OID644940693 
Productbeta-lactamase 
Protein accessionYP_003097971 
Protein GI256374311 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGAGCT TGCGCGCGGT GTCGCAGTGG CCGGTGGACA GCGCGGCGGT GGCCGCGGTC 
TCCTCGGACG GCCGGGTCCT GGGGTCGCAC GGGGACCTGG AGCGGCGCTA CCCGCTGGCC
TCGGTGACCA AGCTGCTCAC CTCGTACGCG GTGCTGGTCG CGGTGGAGGA GGGCGCCGTC
GAGTGGGACG ACCCGGCGGG CCCCGAGGGG TCCACGGTGC GGCACCTGAT CGCGCACACC
TCCGGGCTGG CGTTCGACTC CGACAAGGTC CAGGCCGCCC CCGGCGAGCG CCGGATCTAC
TCCAACCGGG GCTTCGAGGT GCTCGCGGAC GCCGTGGAGC GGTCGAGCGG CATCGCGTTC
GGGGACTACC TGGCCGAGGC GGTGCTCGGC CCGCTCGGCA TGGGGTCGAC GGCGCTGGAG
GGCTCCCCCG CCGCGGGCGG GGTGTCGACG GTGGCGGACC TGGTGGCGTT CGCGGCGGAG
GTGCAGTCGC CGAAGCTGGT GTCGGCCGGG CTCGTCGCCG AGGCCAGGAC CGTGGCGTTC
CCCGGTCTGA AGGGCGTGCT GCCCGGTTAC GGGCTCCAGC GCGAGAACGA CTGGGGGCTG
GGCTTCGAGA TCCGGTCGGC CAAGTCGCCG CACTGGACCG GCACGACCAG CTCCCCCGGC
ACGCACGGGC ACTTCGGGCA GAGCGGCACG TTCCTGTGGT TCGACCCGGC CCTGTCGGCG
GCGTGCGTGG CGCTGACCGA CCGGCCGTTC GGCGAGTGGG CCGTCGCCGC GTGGACCCCG
TTCACGGACT CGGTCGTGGC GGAACTGGCC CGTTAG
 
Protein sequence
MESLRAVSQW PVDSAAVAAV SSDGRVLGSH GDLERRYPLA SVTKLLTSYA VLVAVEEGAV 
EWDDPAGPEG STVRHLIAHT SGLAFDSDKV QAAPGERRIY SNRGFEVLAD AVERSSGIAF
GDYLAEAVLG PLGMGSTALE GSPAAGGVST VADLVAFAAE VQSPKLVSAG LVAEARTVAF
PGLKGVLPGY GLQRENDWGL GFEIRSAKSP HWTGTTSSPG THGHFGQSGT FLWFDPALSA
ACVALTDRPF GEWAVAAWTP FTDSVVAELA R