Gene Amir_0152 details

Gene Information

• Locus tag: Amir_0152
• ID: 8324299
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 163955
• End bp: 165910
• Gene Length: 1956 bp
• Protein Length: 651 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 644940689
• Product: acetoacetyl-CoA synthase
• Protein accession: YP_003097969
• Protein GI: 256374309
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR01217] acetoacetyl-CoA synthase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGACA CGCAGACCGG CACCGCCGCC GGTTCGCCGG AGCCCCTGTG GACCCCCGAC 
CCCGATCGGG TCGCGGCGAG CCGCATGGCC GCCTTCCGCG ACTGGCTGCG CGCGCAGCGC 
GGCCTGGACC TCCCGGACTA CCCGAGCCTG TGGGAGTGGT CCACGAGCGA CCTGGAGGGT 
TTCTGGGGCG CGCTGGCCGA GTTCACCTCC ACCCGGTTCC ACTCGCCCCC CGAGCGCGTG 
CTCGCCGTCG ACGCCATGCC CGGCGCGGTC TGGTTCCCCG GAGCCACCCT CAACTACGCC 
GAGCACGCCC TGCGCCACGA GGGCGTCGCG GTCGTGCTGC GCCGCGAGGA CGGCCACCGC 
GCCGAGCTGA CCTACGCCGA GCTGCGCGCG CGGGTCGCCG CCGCCCGAGC CGCGCTCCAG 
GCGCTCGGGG TGGTCGCGGG CGACCGCGTC GTCGGCCTGG TCCCCAACAC CCCCGAGGCG 
CTGATCGCCT TCCTCGCCGC CGCGTCGCTG GGCGCCACCT GGTCCTCGTG CTCGCCGGAC 
TTCGGCGCGC CCGCCGTGGT CGACCGGTTC GCCCAGGTGA CGCCGAAGGT GCTGGTGGCC 
GTGCCCGGCT ACCGGTACGG CGGGCGCGAC TACGACGTGC GGCCGGTCGT GGCGCGGGTG 
CGGGCCGCCG TGCCGTCCCT GGTCGCCACC GTCCTGATCG GCGGCGACGA GCCCGGAACC 
CTCGGCTGGG ACGCGCTGCT GGCCGAGCAC GCGGGAGCCG AACCGGCCTA CGACCCGGTC 
CCGTTCGACC ACCCGCTGTG GGTGCTCTAC TCGTCCGGCA CCACCGGCCT GCCCAAGGGC 
ATCGTCCACG GCCACGGCGG CATCCTCCTG GAGCACCTGA AGATGCTCGC CCTGCACTCC 
GACCTGGGGC CGGGGGACCG GTTCACCTGG TTCACCACCA CCGGCTGGAT GATGTGGAAC 
TACCTGGTGT CCGGCCTGCT CGTCGGCGCC ACCGCCGTGC TCTACGACGG CAGCCCCGGC 
CACCCCGACC TGTCCGCGCT GTGGCGGGTG GTCGAGCAGG AGCGGGTCAC CTACTTCGGC 
ACCTCGGCCC CGTACCTCCA GGCGTGCCTG AAGGCGGGCC TGCGCCCCCG CGACGACCAC 
GACCTGTCGG CGCTGCGCGT GGTCGGCTCC ACCGGGGCCC CGCTCACCCC CGAGGGCTTC 
CGCTGGGTCG CCGACGCCGT GGGCGACGTG CAGACCGCCT CGGTCTCCGG CGGCACCGAC 
ATGTGCACCG CCTTCGTCGC CGCCGCGCCG GACCTGCCGG TGTGGGTGGG CGAGCTGTCC 
TGCCGGGCCC TCGGCGCGGC CGTCGCCGCG TACGACGAGT CGGGGCGGCC CGTGCTGGAC 
GAGGTGGGCG AGCTGGTGGT CACCAGGCCC ATGCCGTCGA TGCCGGTGTT CTTCTGGGGC 
GACGAGGACG GCGCGCGGCT GCGCGAGGCG TACTTCGAGA CCTATCCGGG GGTGTGGCGG 
CACGGGGACT GGATCCGGAT CACCCCGAGG GGCACCGCGG TCATCTACGG GCGCAGCGAC 
TCCACGCTCA ACCGGGGCGG GGTGCGGATG GGCACGAGCG AGTTCTACCG GGTGGTGGAG 
GCGGTCGACG GCGTGGCCGA CTCGCTCGTC GTGGACACCT CGGACGCGGC CAACCCGGAC 
GGCGAGCTGC TCTGCTTCGT CGTGCTCGAC GCGGGCGCGC CGCTGGCCGA GGTGGAAGCG 
GAGCTGCGCG CGCGACTGCG CGCCCTGCTC TCCCCGAGGC ACGTCCCGGA CCGGTTCGTC 
GAGGTCGCCG AGGTGCCGAG GACGTTGAAC GGCAAGAAGT GCGAGGTGCC GGTGAAGCGC 
ATCCTGGCCG GTGTCGACCC CGAGCGGGCG GTCAGCCGGG ACGCCCTGCG CAACCCCGAC 
GCCCTGCTCC CGTTCCTGAA CTGGATCTCT CGCTGA 

 

Protein sequence

MTDTQTGTAA GSPEPLWTPD PDRVAASRMA AFRDWLRAQR GLDLPDYPSL WEWSTSDLEG 
FWGALAEFTS TRFHSPPERV LAVDAMPGAV WFPGATLNYA EHALRHEGVA VVLRREDGHR 
AELTYAELRA RVAAARAALQ ALGVVAGDRV VGLVPNTPEA LIAFLAAASL GATWSSCSPD 
FGAPAVVDRF AQVTPKVLVA VPGYRYGGRD YDVRPVVARV RAAVPSLVAT VLIGGDEPGT 
LGWDALLAEH AGAEPAYDPV PFDHPLWVLY SSGTTGLPKG IVHGHGGILL EHLKMLALHS 
DLGPGDRFTW FTTTGWMMWN YLVSGLLVGA TAVLYDGSPG HPDLSALWRV VEQERVTYFG 
TSAPYLQACL KAGLRPRDDH DLSALRVVGS TGAPLTPEGF RWVADAVGDV QTASVSGGTD 
MCTAFVAAAP DLPVWVGELS CRALGAAVAA YDESGRPVLD EVGELVVTRP MPSMPVFFWG 
DEDGARLREA YFETYPGVWR HGDWIRITPR GTAVIYGRSD STLNRGGVRM GTSEFYRVVE 
AVDGVADSLV VDTSDAANPD GELLCFVVLD AGAPLAEVEA ELRARLRALL SPRHVPDRFV 
EVAEVPRTLN GKKCEVPVKR ILAGVDPERA VSRDALRNPD ALLPFLNWIS R