Gene Amir_0145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0145 
Symbol 
ID8324292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp157221 
End bp157970 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content72% 
IMG OID644940682 
Productprotein of unknown function DUF81 
Protein accessionYP_003097962 
Protein GI256374302 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTGT TCGAGGCGGT CGTCGTCGCT CTCGCGGGGA TGTTCGCGGG CGCCATCAAC 
ACCGTCGTGG GCTCCGGCAC GCTCGTCACC TTCCCCGTCC TGCTCGCCAT CGGCTACCCG
CCCGTGGTCG CCAACGTCTC CAACAGCCTC GGCCTGGTCC CCGGCTCGCT CAGCGGCGCC
TACGGGTACC GCGAGGAGCT CAAGGGCCAG GGGGAGCGGA TCAGGCGGCT GCTGCCCGCC
TCCGTCCTCG GCGGGATCGT CGGGGCCGTC CTGCTGGTCG TGCTGCCGGA GTCGGCGTTC
TCCGCGATCG TGCCCGTGCT CATCGCCGTC GCCCTCGTGC TCGTCGTCGC CCAGCCGTGG
ATCAACCGCA AGCTCGCCGA ACGCCGGCGG CCCGCGCACG GCGGCGCCGC CCTCTGGATC
GGCGTGCTCC TCGCGGGCAT TTACGGCGGC TACTTCGGCG CCGCCCAGGG CGTGCTGGTC
ATGGGCCTCA TGGGCGCGCT CGTCAACGAC CAGCTCCAGC GCATGAACGC CCTCAAGAAC
GTGCTCACCG CCTTCGTGAA CCTCGTCGCG GGCGTCCTGT TCATCTTCAT CGCCGACGTC
GAGTGGCTGG TCGTCCTGCT CCTCGCCCTC GGCGCCGTCG TCGGCGGCCA GATCGGCGCG
AAGATCGGCC GCAGGCTCCC GCCGCCCGTG CTGCGCGGCG TCATCGTCCT CGTCGGGCTC
GCCGCCATCG CCCAGCTGCT GCTCGCCTGA
 
Protein sequence
MTVFEAVVVA LAGMFAGAIN TVVGSGTLVT FPVLLAIGYP PVVANVSNSL GLVPGSLSGA 
YGYREELKGQ GERIRRLLPA SVLGGIVGAV LLVVLPESAF SAIVPVLIAV ALVLVVAQPW
INRKLAERRR PAHGGAALWI GVLLAGIYGG YFGAAQGVLV MGLMGALVND QLQRMNALKN
VLTAFVNLVA GVLFIFIADV EWLVVLLLAL GAVVGGQIGA KIGRRLPPPV LRGVIVLVGL
AAIAQLLLA