Gene Amir_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0132 
Symbol 
ID8324278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp142456 
End bp143352 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content70% 
IMG OID644940668 
Productglycosyl transferase family 2 
Protein accessionYP_003097949 
Protein GI256374289 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCAC TGCCCAAGGG GTCCGTCGTC GGGGTCGTGG TGACCCGGCA CCGGCGCGAA 
CTGCTGGCCG ACTCGCTCAA GGTGCTCGCC TCGCAGACGA GGCAGCTCGA TCACCTGGTG
GTCGTGGACA ACGGTCCCGA CCAGCCGGTG GACGACCTGG TCGCGGAGTG CCCCATCCCC
ACCACCTACC TGGTGTCGCA CCGGAACCTC GGTGGCGCGG GCGGGTTCGC GCTGGGGATG
CTGCACGCGC TCTCGCTGGG CGCGGACTGG GTGTGGCTGG CCGACGACGA CGGCAGGCCC
GCCGACGAGA CCGTGCTGGA GGTGCTGCTC CAGGAGGCCG GTCGCCGGAA CCTGGCGGCG
ATCTCCCCGG TCGTCACGAA CATCGAGCGC CCGGAGAAGC TGGCGTTCCC GATGCGCCGG
GGCCTGACCT GGAAGCGGGA CACCGGCGCG CTGGGCTCCG ACTTCCTGCC GGGGATCGCG
TCGCTGTTCA ACGGCGCCCT GTTCCGGGCG TCCACGCTCG ACGTGGTCGG CGTTCCGGAC
TACCGGCTGT TCTTCCGGGG CGACGAGGTG GAGATCCACC GCAGGCTGGT GCGCAGCGGG
CTGCCGTTCG GCACCTCGCT GAAGGTGGCC TACCTGCACC CGGACGGCTC GGACGAGTTC
AAGCCGATGC TGGGCGGCCG GTTCCACGCG CAGGACCCGG AGAACCAGAT CAAGCGGTAC
TACACCTACC GCAACCGCGG CTACCTGCTG TCCCAGCCGG GGATGCGCAA GCTGGGCCTG
CTGGAGCTGG CCCGGTTCGG GCTGTACTTC CTGGGCGTCC GCAAGGACCC CAAGGCGTTC
GTGGAGTGGC TGAAGCTGGT GAGGCTCGGC CAGCGGGAGC GCTTCTTCCG GAAGTGA
 
Protein sequence
MSALPKGSVV GVVVTRHRRE LLADSLKVLA SQTRQLDHLV VVDNGPDQPV DDLVAECPIP 
TTYLVSHRNL GGAGGFALGM LHALSLGADW VWLADDDGRP ADETVLEVLL QEAGRRNLAA
ISPVVTNIER PEKLAFPMRR GLTWKRDTGA LGSDFLPGIA SLFNGALFRA STLDVVGVPD
YRLFFRGDEV EIHRRLVRSG LPFGTSLKVA YLHPDGSDEF KPMLGGRFHA QDPENQIKRY
YTYRNRGYLL SQPGMRKLGL LELARFGLYF LGVRKDPKAF VEWLKLVRLG QRERFFRK